KEGG   Cicer arietinum (chickpea): 101515641
Entry
101515641         CDS       T02819                                 
Name
(RefSeq) polyadenylate-binding protein 7
  KO
K13126  polyadenylate-binding protein
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03015  mRNA surveillance pathway
cam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101515641
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101515641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cam03019]
    101515641
   03041 Spliceosome [BR:cam03041]
    101515641
Messenger RNA biogenesis [BR:cam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     101515641
   mRNA cycle factors
    Stress granule specific factors
     101515641
Spliceosome [BR:cam03041]
 Complex C
  Other components
   Complex C specific factors
    101515641
SSDB
Motif
Pfam: RRM_1 PABP Nup35_RRM_2 RRM_7 RRM_3
Other DBs
NCBI-GeneID: 101515641
NCBI-ProteinID: XP_004494108
UniProt: A0A1S2XT25
Position
Ca3:34658580..34663161
AA seq 635 aa
MAVPPSVAATPASLYVGDLHPDVSDGQLHEAFSDFKTLASVRICRDSSTAKSLCYGYVNF
LSPQDAINAIELKNHSTLNGKAIRVMWSRRDPDARKSSIGNVFVKNLAESIDNAGLEDMF
KKFGNILSSKVVMSEDGKSKGYGFVQFETEESANTAIEKLNGSTIDDKQIFVGKFVKKSD
RVMSGPDARYTNLYMKNLDLDITETLLREKFSSFGKIVSLAVAKDNNGMSKGFGFVNFDN
PDDAKRAMEAMNGSQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVMKYKGSNIYVKN
IDDNVSDEGLRDHFSACGTITSAKVMRDDKGISKGFGFVCFSTPEEANKAVNTYHGFMFH
GKPLYVALAQRKEDRQAQLQLQYAQQIAGLAGPSTAIVPGGYPPYYYTATGVVSHAPPQA
GLMYQPLPLRPGWRANGSAPPVRSFQQSPIPVASNNTRQHRQNRGRMNGHAVSQGNTHSG
TYMPQAQQASQSVISPRESSTQQRTGQAKYVPSGRHRDMEKGSGFSSGGSNSGGSSQGTG
VLHSMLANATPEQQKDILGEHLYMLVQKLKPNLAAKITGMLLEMDNAELLVLMESPESLS
AKVEEAFQVLKNSKTKVSGQEVLHSNFFSAEVAVN
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggcggttcctccctcggtcgccgccactccggcttctctttacgtcggcgacctccat
cccgatgtctccgacggacagcttcacgaagccttctctgatttcaagactctcgcttct
gttcgcatttgcagagactcttccaccgccaaatcactctgttatggctacgtcaacttc
ctttctcctcaagacgcaattaatgcgattgagctgaagaatcattctacattgaatgga
aaagcgataagggtcatgtggtcgcgtcgtgatcctgatgcaaggaaaagtagcataggg
aacgtgtttgttaagaacttagctgaatcgatagataatgctggattagaagatatgttt
aaaaagtttggcaatattttgtcaagcaaagttgtcatgtctgaggatgggaagagcaaa
ggatatggctttgttcaatttgaaacagaggaatctgcaaatactgctatcgaaaagctg
aatggctctactattgatgataagcagatatttgttgggaagtttgtcaagaaaagtgac
cgcgttatgtctggccctgatgctagatatacaaatttgtacatgaagaatttggactta
gatattacagaaacacttctgcgggaaaagttttcctcttttgggaaaattgttagcttg
gctgttgcaaaggacaacaatgggatgtcaaagggttttggctttgtgaactttgataac
ccagatgatgctaaaagggcaatggaagcaatgaatggatcacaacttggttcaaagatt
ctgtatgtagccagggcacaaaagaaggctgagcgtgagcagatcttgcaccagcaattt
gaggagaaacggaaggagcaagtcatgaaatataaggggtcaaacatttatgtgaagaac
atcgatgataatgttagtgatgaaggactgcgagatcattttagtgcatgtggcactata
acttctgcaaaagttatgcgagatgacaaagggattagtaaaggatttggttttgtgtgc
ttctccactcctgaggaggccaataaagctgtgaatacttatcatggattcatgtttcat
ggtaaaccactatatgttgctcttgctcagaggaaagaggacagacaagcacagttgcag
ctccagtacgcacagcaaattgcaggactagctgggccttcaactgccattgtccctggt
ggatatcctccttactactacacagctactggtgttgtttcacacgcgcctcctcaagcc
gggctcatgtatcaacctctgccattgaggcctggatggagggctaatggctctgcacct
cctgttagatcatttcaacagtcacccatacctgttgcttctaataatactagacagcat
aggcaaaataggggcaggatgaatgggcatgcagtatcacagggaaatactcactctggt
acatatatgccacaagcccagcaggcttctcagtcagtgatttctccaagagagtcaagt
actcagcagagaaccggacaggctaagtacgtacctagtggacgccaccgtgatatggaa
aaaggatctggattctcatctggtggttcaaactctggcggaagctcccagggaacagga
gtgctccatagcatgcttgctaatgctactccagagcagcagaaggacatacttggcgag
catctatacatgcttgtccaaaaactcaagcctaacctagcagcgaagattactgggatg
cttctggagatggacaatgcagaattgctggttctcatggaatcgccagagtctctttct
gccaaggtggaagaagctttccaagtgctgaagaactctaaaactaaagtttctggccag
gaagtacttcattcgaatttcttctcagctgaggttgcagtgaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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