KEGG T05727: CVIC12175

Campylobacter sp. RM12175: CVIC12175_0570

Entry

CVIC12175_0570    CDS       T05727

Symbol

rluD

Name

(GenBank) 23S rRNA pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

camz Campylobacter sp. RM12175

Brite

KEGG Orthology (KO) [BR:camz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:camz03009]
    CVIC12175_0570 (rluD)
Enzymes [BR:camz01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     CVIC12175_0570 (rluD)
Ribosome biogenesis [BR:camz03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CVIC12175_0570 (rluD)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 ThiS HTH_17 S4_2 FlpD

Other DBs

NCBI-ProteinID:

ARR03705

Position

549551..550531

AA seq 326 aa
MTEFISSKSTRLDQELALYLKISRNQVLSLIKGGNVSVNDKVVTKAGFNLNLGDKISFIL
PQTTQIQSEFKAEFDVEILYEDSDILVINKPIGVTVHPAPSVKEATLVEWLKQKNYTLST
IGGVERAGIVHRLDKGTSGVMVVAKNNESHASLSSQLSSKDMGRIYLALCDLPLKENCII
DRPIGRHPQNRLKNTIVSGAKSAKSAFANILTTQNKRVNLIAAKLFTGRTHQIRVHLASI
NRHILGDDLYGFKSNSDRISRIFLHAYILRLIHPRSNQIMEFKAPLPNEFYELIGKEVNK
EIVDESTTPSILCDIFRDSSYWMYCN

NT seq 981 nt +upstreamnt +downstreamnt
ttgactgaatttatatcctctaaaagcacaagattagaccaagaattagcattatatctt
aagatttcaagaaatcaagtattaagcttaattaaaggtggtaatgtaagcgtaaatgat
aaagtagtaacaaaagctggatttaatctaaatttaggtgataaaattagctttatcttg
ccacaaacaactcaaattcaaagtgaatttaaagctgagtttgatgtagaaattttatat
gaagatagcgatattttagttattaataaaccaattggcgttactgttcatccagcacca
agtgtaaaagaggctacgcttgtagagtggctaaaacaaaaaaattacaccctctcaacc
ataggaggtgttgagcgagctggaattgttcatcgtttagataaaggcacaagtggagta
atggtagtagctaaaaataatgaatctcacgcaagtctaagctctcagctaagtagtaaa
gatatgggtagaatttatttagcactttgtgatttaccgcttaaagaaaattgcataatt
gatagaccaattggaagacatccgcaaaatagactaaaaaatactatagtaagtggagca
aagtcggctaaatcagcatttgccaatattttaacaactcaaaataaaagggtaaattta
attgctgctaagctatttactggacgaactcaccaaattagagtgcatttagcaagcata
aatcgtcatattttaggagatgatttatatggttttaagagcaatagtgatagaataagc
agaatttttttacatgcttatattttaagattgattcaccctagaagtaatcaaattatg
gaatttaaagcccctttgcctaatgagttttatgaattaattggcaaagaagttaataag
gagatagtagatgagagtactacgcctagcatcttgtgcgatatctttagggatagttct
tactggatgtattgcaactaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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