KEGG   Capsicum annuum (peppers): 107839872
Entry
107839872         CDS       T04646                                 
Name
(RefSeq) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cann03016]
    107839872
Enzymes [BR:cann01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     107839872
Transfer RNA biogenesis [BR:cann03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    107839872
 Prokaryotic type
    107839872
SSDB
Motif
Pfam: PseudoU_synth_1 V4R
Other DBs
NCBI-GeneID: 107839872
NCBI-ProteinID: XP_016539004
Position
8:complement(158062767..158070853)
AA seq 384 aa
MKKDQSQPLISETSKHSLDQRPDSPQRPAKFAKVNEDNIAEEKELVSRTMNPNPRLQRYL
IAIEYIGTRFAGAQQQPNCRTVVGVLEEAFKKFVGQPVSVFCSSRTDAGVHALSNVCHVD
VERTSKRKPGEVLPPHEPLVVKRAVNHFLQKNEGDIMVIDVRCVPADFHARYKAQERTYF
YRLLSGPEPVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAAACQANSPIRTL
DELNITEVVSTPYFPSISERLKSSNVIEDPTVSIGSDTNHSHISLNTNEEKLEGPSGEAC
QKFGLRRRHRCYVVTARARSFLYHQVRLLVGVLKSVGAGDLTAPDVKRILEAKSIAEAPP
MAPACGLYLGHVKYDLPPGTYQSQ
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgaaaaaggatcaatcacagccgttgatttcggagactagtaaacactcgcttgatcaa
cggcctgattctcctcaacggccggcgaaattcgccaaggtaaacgaggacaacatcgcc
gaagagaaagagttggttagtagaacaatgaatccgaatcctcggctacagcggtatttg
attgcgattgagtatataggaacgcgattcgccggtgcgcagcagcaacctaattgcaga
acagtcgtcggtgttcttgaggaagccttcaagaagtttgttggacagccagtatcagta
ttttgctctagtcgaactgatgctggagtacatgctctttcaaatgtttgccatgtagat
gttgaaaggactagtaaaaggaaacctggtgaagtgttacctccccatgagcctttggtg
gtaaaaagagccgtgaaccactttttacagaagaatgagggtgatataatggttattgac
gttcgatgtgttccagctgattttcatgccagatataaagctcaagaacgcacgtacttc
taccgattgttatctggaccagagccagtatcaagctttgagagagaccgggcttggcat
gtgcctgagaatctggatcttcttgccatgcagaaggcatgtaacattcttattggacgt
catgacttcagttctttcagagcagctgcttgtcaggcgaactcacccatcagaactctg
gatgaacttaatattactgaggtcgtttcaactccttattttccatcaatctcagagcga
ctaaagagcagtaatgtgatagaggatccaactgtatccatcggttcagacaccaaccac
tcccacatctctttgaacaccaacgaagaaaagttggaaggtccaagtggtgaggcttgt
caaaagtttggccttagaagaagacaccgctgctatgtggtaaccgcaagggcacgatct
tttctttaccatcaggttaggctgcttgttggagtcctcaagtcagtgggggctggagat
ctaacggctccagatgtaaaacgcatccttgaagcaaaatccatcgctgaagcacctccg
atggctccagcttgtggtctttatcttggacatgtcaaatatgatttgcctcctgggact
tatcaaagccaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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