KEGG   Capsicum annuum (peppers): 107843917
Entry
107843917         CDS       T04646                                 
Name
(RefSeq) transcription initiation factor IIB-2
  KO
K03124  transcription initiation factor TFIIB
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107843917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cann03021]
    107843917
Transcription machinery [BR:cann03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     107843917
 Prokaryotic type
  Archaeal type
    TFB
     107843917
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Ribosomal_S27e HTH_Tnp_ISL3 HTH_5
Other DBs
NCBI-GeneID: 107843917
NCBI-ProteinID: XP_016543833
Position
10:complement(219222236..219228038)
AA seq 311 aa
MDAYCTDCKKSTEVVFDHSAGDMVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGD
PTNPLLSDGGLSTVISKPNGTTSDFLTSSLGRWQSRGSNSDRSLILAFKAIGVMSDRLGL
VATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGASKK
EIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQEAVKKSEEFD
IRRSPISIAAAVIYIVTQLSDDKKPVKDVSLATGVAEGTIRNSFKDLYPYLSKIIPSWYA
QGQDLKNLSSP
NT seq 936 nt   +upstreamnt  +downstreamnt
atggatgcgtattgtacggactgtaagaagagcacagaagtggtgtttgatcattcagca
ggagatatggtatgttcagaatgtggtttagttttggaatcacattcgattgatgaaaca
tcagaatggagaacttttgctaatgagtctggtgataatgatcctgttcgtgttggagat
cctactaatcctttgctgtctgatggtggtttatcaactgtgatctcgaagcctaatgga
actactagtgatttcttgacgtcttctttgggtcgatggcagagtcgtgggtcgaattct
gatagatctcttatcttggcttttaaagccattggtgttatgtctgataggttgggcctg
gttgcaaccataaaggaccgagctaatgagatatacaagaaggtagaagatcaaaaatct
agtagaggaaggaaccaggatgctatattggctgcttgcttatatattgcttgtcgacaa
gaagataagcctcgaactgtgaaggaaatttgctctgtcgcgaatggagcttcaaagaag
gaaattggccgagcaaaggaatacattgtgaaacaactagagctcgagatgggtcaatct
gtggaaatgggaactatacatgctggagatttcatgcgacgcttttgttcaaatctcggg
atgacaaatcagacagttaaagccgctcaagaagctgtaaaaaaatcagaggagtttgac
ataaggagaagtcccatttcgattgctgcagcagttatctacatagtcactcagctttcg
gatgacaagaagccagttaaagatgtttcacttgcaactggagttgcagaaggcacgatc
cggaattcattcaaggatctatacccttatctctcaaagattataccaagttggtatgca
caaggtcaggacctaaagaacctcagcagtccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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