KEGG   Capsicum annuum (peppers): 107850355
Entry
107850355         CDS       T04646                                 
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cann03036]
    107850355
Chromosome and associated proteins [BR:cann03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107850355
   microRNA pathway
    RISC loading complex
     107850355
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer Helicase_C DEAD ResIII PAZ dsrm SWI2_SNF2 PXA Dicer_dsRBD
Other DBs
NCBI-GeneID: 107850355
NCBI-ProteinID: XP_047256670
Position
12:complement(9165144..9176577)
AA seq 1403 aa
MEQINGVVFGNQQLAADPLPFARSYQLEALETAIKQNTIVYLETGSGKTLIAIMLLRSYA
YLLRKPSPYIAVFLVPTVVLVTQQGDALKMHTDLKVGTYWGEMGVDFWDASTWKHEVDKH
EVLVMTPAILLSALRHRFLQLNMIKVMIFDECHNARGRHPYASIMSEFYHRQLTRDSAQL
PRIFGMTASPIKSKGSSTADNYWKQISDLENLMNSKVYTCLSESVLAEYIPFSNTKLEMY
EHVDIPCTLSLSLAHDLEMLKGKHECSISKSNMSDNSAGSARKRLSKLHSAFLFCLTEMG
VWLAFKAAEFLSHEETSFFSWGVLDVCCQTIVRNFSLGASKIFSARLPSGPHWSIGGDIQ
ANTEAGYLSSKVNCLLELLLKYRHLKDLRCIIFVERIITAIVLRSLLNELLPELCGWRTE
YTAGHISEVQSQSRKIQSKIVEEFRKGLVNIIVATSILEEGLDVQSCNLVIRFDPSATVC
SYIQSRGRARMQNSDFLLMVRSGDTSTRTRMQKFKASGEIMRQESLRHASIPCSPLDDEL
YDEPYYEVERTGAIVTLSSSVSLLHFYCSRLPSDGYFKPNPRFVIDKETAAYTLQLPISC
PLRSISVKENSKAARQLACLAACKELHHVGALTDNLVPDIVEEEAINKELECQMHTVEES
KYFPPELVSRGSNDSEAVYYCYLVQLQPDFRNDFQLHGILLAVRTKLEFDDKILSFDLDI
DRRGRLQVLLNYSKLVKLTSEEIQRCKRFQVSIFRILFDRDLSKLQDALAAVQSPIGSAV
SDFLLLPSLGTTPEINWRCVNSLLFPSQELGDKHTDFCSTQRHKRSVNTKTGVVCSCMLE
NSLAWTPHNGRIYCITGFLDNLDCNSLLDLRTRESITYREYFKKQHEINICFEEEPLLRG
KHICKVHNYLQRCRTQKAKDSTNSSAELPPELCSLIMSPVSISTLNTYSYVPSIMHRIES
LVMASNLKRMLFDHCPLNIFIPTAKVLEAMTTKKCLEKFHLESLETLGDSFLKYAVSTRL
FKTYENHHEGLLSFKKNTFISNAALCKLGCARKIPGFIRNEPFDLKTWLIPGDNSQVHSF
DEDFLMPSVKMYSRGKLKIKGKRVADVVEALTGAYLSSGGEVAALSFMKWLGLEIDFANA
PLPRHFPVNAEKLVNVRYLESLLHYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDA
VLDYAVTAYLYFKYPGLTPGLITDLRSASVNNECYAQSAVKAGLHKHILHASQELQRQIS
RTAEDFGLLDLVSTFGWEAETTFPKVLGDVIESLAGAIFVDSGFNKDITFRSIRPLLEPL
ITPQTIKLQPKRELSELCDQKGYIKKKDIVSHENGVAYITVEVEADGVIHKDTRSGRDKK
MAKKVACKTVLKSLKECAANAQH
NT seq 4212 nt   +upstreamnt  +downstreamnt
atggagcaaattaatggagtggtctttggaaaccaacagctcgctgctgatcctctgcct
ttcgcgagaagttatcagttggaagcgttggagactgcaattaagcaaaacacaattgtg
tacttggagactgggtctggaaagaccctgattgctatcatgcttctgagaagctacgcg
taccttcttcgtaagccgtctccgtacattgctgttttcttggtccccacagttgttttg
gtgactcagcaaggagacgcactgaaaatgcataccgacttgaaagtcggcacatattgg
ggagaaatgggggtcgatttctgggatgcatctacatggaaacatgaagtggataaacat
gaggtactggttatgactccggcgatactactttctgctttgaggcacaggtttttacaa
ctaaacatgataaaagttatgatatttgatgagtgccacaatgcacgaggcagacacccc
tatgccagcataatgtcggaattttatcatcgacagttaactcgtgatagcgcacagctt
ccaagaatattcgggatgactgcttcccctatcaagtctaaaggttctagcacggcagat
aattattggaagcagattagtgaccttgagaatcttatgaattctaaggtatacacgtgt
ctcagtgaatccgttctggcggagtatatcccattctcaaatacgaagctggagatgtat
gaacatgtggatattccttgcacattgtctctcagtttagctcatgatctggaaatgttg
aaaggaaagcatgaatgttcaatttcaaaatcaaatatgtccgacaatagtgctggatct
gcaagaaaaagattatcaaaacttcattcggctttcctattttgtttgactgagatgggt
gtttggctggctttcaaggctgctgagttcttgtcccatgaagaaactagtttcttttca
tggggagtattagatgtatgttgtcagacaattgtcagaaatttcagtctgggtgcttcc
aagattttctcggctcgcttaccttctgggccacattggtcaattggtggtgatattcag
gcaaatacggaggctggatatttgtcatccaaagttaattgtcttctagagttgcttctc
aagtacaggcacctgaaggatttgagatgtataatatttgttgagagaattattacagcc
attgttcttcggtctctgttgaatgagttgcttccggaactatgtggttggagaaccgag
tacaccgcaggacatatttctgaggtgcagtcacagagtaggaaaattcaaagcaaaatt
gttgaagaatttcgtaagggtctggtgaacattattgtagcgacatctattcttgaagaa
ggcttagatgttcaaagttgtaaccttgtaattcgattcgatccctcagctactgtttgt
agctatatacaatctcgtgggcgagctcgaatgcagaactccgactttcttctgatggtc
agaagtggggatacttcaacacgcactcgcatgcaaaaatttaaggctagtggggaaata
atgcggcaagaatcattacgtcatgcatctattccatgttcgcctctggatgatgaactg
tatgatgagccttactacgaagttgaaaggactggagcaattgttaccctcagttccagt
gtctcattgttacacttctattgctcaaggctaccatcggatgggtactttaaacccaat
cctaggtttgtgattgataaagaaacagcagcctacaccctacaacttcccataagttgc
cccctgagaagtattagtgtaaaggagaatagcaaagcagcgaggcaacttgcatgcttg
gcagcttgtaaagaacttcatcatgtgggtgccttgactgataatcttgttcctgatatc
gtggaggaagaagccatcaacaaagaattggaatgtcaaatgcatacagttgaagaatca
aaatactttccaccagagttggttagtcgtggcagcaatgattcagaagcagtgtactac
tgctacctggttcagttgcaacctgactttcgcaacgactttcagcttcatgggatttta
cttgctgttaggactaagctcgagtttgatgataaaatattgtcttttgacttggacatt
gataggaggggacgcttgcaagttctactaaattatagtaaacttgttaagcttacttct
gaggagattcaacggtgtaagagatttcaagtcagtatcttcagaattctctttgaccgt
gatctgagtaaactgcaggacgctttagctgcagttcaatcgcctattggttctgcagtt
tctgattttcttctgctcccatctttgggtacaacccctgaaataaattggagatgtgtg
aattctttgctctttccttctcaagagcttggggataagcatacggatttctgttcaaca
caacgtcacaaacgcagcgtgaacaccaaaactggggtggtgtgcagctgcatgttagag
aattcgttggcctggacacctcataatggccgtatatactgcattacagggtttttggat
aatctggattgcaactctctgttggatttgagaaccagagaatccattacgtacagagaa
tacttcaaaaagcagcatgagatcaacatatgctttgaagaagaaccacttcttagggga
aagcatatttgtaaggtgcacaattacctccagagatgcagaactcagaaagctaaagat
tcaactaattcatctgctgagttgcctcctgaactttgttctctcatcatgtcacctgtc
tctatttctacccttaatacctattcatatgttccttcgatcatgcatcggatcgagtcc
ttggttatggcctccaacttgaaaagaatgctttttgatcactgcccactaaatattttt
atcccaaccgctaaggttttggaagcaatgactacaaagaaatgcctcgagaagtttcat
ttggaatcacttgagacacttggagactcctttctcaagtatgctgtcagtacacggctg
ttcaagacatatgaaaatcatcacgagggtcttctcagctttaagaaaaacacattcatt
tccaatgctgcactgtgcaagcttggatgtgctcgtaaaatcccaggatttatccgtaat
gaaccattcgatcttaaaacatggctcattcctggtgataattctcaagttcacagcttt
gacgaagatttcctgatgccttcagtaaaaatgtatagtcgggggaagctgaaaattaaa
ggtaagagagtagctgatgtcgttgaggcactgacaggtgcctacctcagctcaggcggg
gaagtggcggctttatcatttatgaaatggcttgggctggaaattgattttgctaatgca
cctctgccaagacacttccccgtgaatgctgagaagctagtcaatgtcagatacttggaa
tccctgctacattacaagttccatgatccttctctgcttgttgaagcacttactcacgga
tcttacatgctacctgagattccacgatgttatcagcgcttggaatttcttggagatgca
gtgctagattatgctgttaccgcttatctctatttcaaatatccgggattgactccagga
cttattaccgatttgaggtctgcttctgtaaacaatgaatgctatgctcaatctgcagtt
aaggctggcctgcacaagcacattcttcatgcctcgcaagagctgcaaaggcagataagt
cgtactgctgaggatttcgggttattggatcttgtttccacgttcggatgggaggccgaa
actactttccctaaggtgcttggagatgttatcgagtcccttgctggtgcgatctttgtt
gattctggcttcaacaaagatattacatttcggagcatacgacctcttctggaaccgttg
attacacctcaaacaataaaactccagccaaaaagagagttgagtgaactctgtgaccag
aaaggttacataaagaagaaggatatcgtctctcatgagaatggcgttgcatacattaca
gtagaggttgaagcagatggtgttattcacaaggatacgcgctcgggacgagacaaaaaa
atggccaagaaggtggcttgcaaaactgtgctcaagtctctgaaagaatgtgcagccaat
gcgcaacattag

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