KEGG   Capsicum annuum (peppers): 107854542
Entry
107854542         CDS       T04646                                 
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
  KO
K11838  ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107854542
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cann01002]
    107854542
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cann04121]
    107854542
Enzymes [BR:cann01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     107854542
Peptidases and inhibitors [BR:cann01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   107854542
Ubiquitin system [BR:cann04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    107854542
SSDB
Motif
Pfam: USP7_ICP0_bdg UCH USP7_C2 UCH_1 MATH RA
Other DBs
NCBI-GeneID: 107854542
NCBI-ProteinID: XP_016555035
Position
10:214591997..214616576
AA seq 1148 aa
MTMLNPQPLDQQEDEEMLVPHSDLVEGPQPLVEGPQPMEVTPHENATTGENQAVDEPQAS
RFTWTIDDFSRLSVKKLYSEAFVVGSYKWRVLIFPKGNNVECLSMYLDVADSATLPYGWN
RYAQFSLTVVNQINPKYSVKKETQHQFNQRESDWGFTSFMLLSELYDPNKGYLVNDKVVI
EADVAVRKVIDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYQAEAHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL
ELDLDREDGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDLKRALEEQYGGEEEVYISNRTSQLCLTVSCVDSCLLLLLQLPQTNPGFNNTPFKF
TKYSNAYMLVYIRESDKDKIICDVGEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTII
KVARDEDLREQIGKEIYFDLVDHDKVRSFRIQKQMPFNLFKEEVAKELGIPVQFQRFWIW
AKRQNHTYRPNRPLTPQEELQLVGQLREVSNKTNNAELKLFLEVECGLDLIPGPPPDKSK
DDILLFFKFYDPEKEELRYVGRLFVKGTSKPIEILPKLNELAGFASDQEIELFEEIKFEP
SVMCERLDRKASFRFSQIEDGDIICFQKKASPEVEEQVRFPDVPSYLEYVKNRQIVHFRA
LEKPKEDDFCLELAKSDTYDEVVERVAQRLGVDDPSKIRLTPHNCYSQQPKPNPIKYRSV
DHLVDMLIHYNQISDILYYEVLDIPLPELQCLKTLKVAFHHSTKDEIEILNVRLPKQSTV
GDVLNEIKSKVELSHPNAELRLLEVFYHKIYKIFPLSEKIENINDQYWTLRAEEIPEEEK
KLGPHNRLIHVYHFTKETPQNQMQVQNFGEPFFLVIHEGETLAEIKVRIQKKLQVSDEEF
SKWKFAFLSLGRPEYLQDLDIVSSRFQRRDVYGAWEQYLGLEHADNTSKRPYVNQNRHTF
EKPVKIYN
NT seq 3447 nt   +upstreamnt  +downstreamnt
atgaccatgctgaatcctcaaccgttggatcagcaggaagacgaggagatgcttgtgcca
cattctgacttagttgaaggtcctcagcctttagtggaagggccccagccaatggaagtg
acacctcacgagaatgctactacgggggagaaccaagccgtggacgagccacaggcttct
cggtttacctggacaattgatgatttctctcggttatctgtgaagaagctatattctgag
gcttttgttgttggtagttataaatggagagtgcttatatttccaaaaggaaacaatgtg
gagtgtttgtcaatgtatttagatgtggcagattcagctacattgccatatgggtggaac
agatatgcccaattcagcttaacggttgtaaatcaaataaaccccaaatattcagtaaaa
aaagagacgcagcaccagtttaaccaaagagagagtgattggggcttcacgtcattcatg
cttctaagtgagctttatgatcctaataagggatatcttgtaaatgataaagttgttatt
gaagctgatgttgctgtaaggaaggtaattgattactggacatatgactcgaagaaagag
acaggctatgttgggcttaagaatcagggagctacttgttacatgaattctctcctacaa
accttgtaccatatcccctactttagaaaggctgtgtatcatatgccaaccacagagaat
gacatgccatcagggagcattccattggctctgcaaagtttattttataagctccaatat
agtgataccagtgtggcgacaaaagaattgacaaaatcttttggatgggatacatatgat
tcattcatgcagcatgatgtgcaagaactaaaccgagtgttgtgtgaaaagcttgaagac
aagatgaagggtactgttgtggaagggacaattcagaagttatttgaggggcaccatatg
aattacatagaatgtattaatgtggacttcaaatcaacaagaaaagagtcattttatgat
cttcagcttgatgtcaaaggctgccgcgatgtttatgcttcttttgacaaatatgttgaa
gtcgaacgcctagaaggtgataataagtaccaggctgaggcacacggtttgcaggatgca
aaaaagggtgtactatttattgacttccctccagttctccaacttcagttaaagaggttt
gaatatgatttcatgcgagatactatggttaagataaatgaccgctatgaatttcctcta
gagctcgaccttgatagggaggacggaaaatatttgtctcctgaagcagataggagtgtc
cggaatctttatactcttcatagtgtgttggttcatagcggtggtgtgcatggtggacat
tattatgctttcatcaggccaacactgtctgatcaatggtataagtttgatgatgaacgg
gtgacaaaagaagaccttaagagggctctagaggaacaatatggtggagaggaggaggta
tacatctctaacagaacatctcaattgtgtcttactgtttcatgtgttgattcttgctta
cttttgcttttacagttgccacagacaaatcctggctttaacaatactccctttaagttt
acaaaatactccaatgcttacatgcttgtttatatacgtgagagtgacaaggataaaata
atctgtgatgtcggtgagaaggacattgcggaacacctaaggataaggttgaagaaagaa
caagaagagaaggaggacaagagaagatacaaagcacaagcccacctttatacaattatc
aaggttgcacgtgacgaggatcttagagaacagattggtaaggagatttattttgatctt
gttgatcatgacaaagttcgtagctttcgaatccagaaacagatgccttttaaccttttc
aaggaggaggttgcaaaagaattgggtatcccagttcaatttcagcgattttggatttgg
gcaaagcggcaaaatcacacttaccggcccaatcgtccattaactccgcaggaggaacta
caattagttggtcagttgagggaagtttccaacaagaccaacaatgccgagttaaaatta
tttttggaagtggaatgtggcctggatctcattcctggccctccacctgacaaaagtaaa
gatgatatactccttttctttaagttttatgatcctgagaaagaagagctccgttatgtt
ggtaggctttttgtgaagggtactagtaagccaattgaaatactcccaaaacttaatgaa
ttggctggatttgcttctgaccaagaaattgaactttttgaggaaataaaatttgaacct
tctgtcatgtgcgaaagactagacagaaaggcttcatttcgatttagccagatagaagat
ggggatattatatgctttcagaagaaagcttctcctgaagttgaagaacaagtccgattt
ccagatgttccttcatatctggagtatgtcaaaaatcgccagattgtccatttcagagcg
ctggagaaaccgaaggaggatgatttctgtctggagttagcaaaaagtgatacgtatgat
gaagtagtggagagagtggcacagcggcttggtgtggatgatccatccaaaattaggctt
actcctcataactgctactcgcagcaacccaagcccaacccaatcaaatatcggtctgtg
gatcatctggtagacatgcttatccattacaatcagatctccgatattctgtattatgaa
gttttggacatacctcttccagaattacagtgtctgaagacgctcaaagttgccttccat
cattctacgaaggatgagattgaaattctgaatgtaagattgcctaagcagagtaccgtg
ggggatgttcttaatgaaatcaaatcaaaggtagaattgtcccatccaaatgccgagctt
agattactcgaggtcttctatcacaaaatttataagatctttccgctcagtgagaagatt
gagaatataaatgaccagtattggacattgcgggcagaggaaataccagaggaggagaaa
aagcttggtccccataatcgactaattcatgtttatcattttacaaaagagactccccaa
aatcaaatgcaagtgcagaattttggagaacctttctttctggtcatccatgaaggtgaa
actttagcagaaattaaagttcgcattcaaaagaaattgcaggtttcagatgaggagttc
tctaagtggaaatttgcatttttatcattgggacgcccagaataccttcaggacttggac
attgtatccagccgttttcagaggagagatgtttatggtgcttgggagcagtaccttgga
ttggagcatgcagataatacatctaagaggccatatgttaatcagaaccgtcacacattt
gaaaagccagtcaagatatacaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system