KEGG   Capsicum annuum (peppers): 107870116
Entry
107870116         CDS       T04646                                 
Name
(RefSeq) RNA-dependent RNA polymerase 6
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cann03036]
    107870116
Enzymes [BR:cann01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     107870116
Chromosome and associated proteins [BR:cann03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     107870116
SSDB
Motif
Pfam: RdRP
Other DBs
NCBI-GeneID: 107870116
NCBI-ProteinID: XP_016572020
UniProt: A0A1U8GLH5
Position
5:1912561..1922665
AA seq 1196 aa
MGSEGSEMTLVVTQISVGGFDNNVNAKKLSEYLEEQVGQVWRCRLKTSSTPPESYPVYDI
DAEKVRRMNNYEKVEPHAFVHFASSGSAKNALAAARRDELLLEKPLKVSLGPENFHKMNQ
RRSDTLPYKFSDVNVEIGALVSSDDFVVGWRGPHTGVNFLVDPFDGTCKILFTKDTVFGF
KGEGRHAVIKCNFKIEFLLREINEIKEYKDFSSLVILLHLASAPLVFYRTADDDIEESVA
FDLLDDDDQWIRTTDITCSGAIGRLNTYRISIRPRNGPSFNKAMNYFKSSRVPVVEQRIG
QRLRVRDEPDFGVSMSEPFFCFHNHEGISFKVLFMVNAVMHKGIINQHQMTAEFFSLLRT
HEEGVNLSALKHIFSYKRPVNDAIHKLSRIQRWLFNNPNLLERTGQLDDIVEVRRLAITP
TKAYCLPPTVELSNRVLRKYKHVSDRFLRVTFMDEGMRNLNRKVLTYYAANIVREITSNS
NPQRTAIFQRVKSMLINGFYLCGRKYSFLAFSANQLRDRSAWFFAETPEIRVPNIINWMG
MFSNRNVAKCAARMGQCFSSTYATVEVLPSKVNSELPDIERNDYVFSDGIGMMSEDLAIE
VAEKLQLSVNPPCAYQIRYAGYKGVVTCWPGKNDGFSLSLRTSMKKFDSNHTILEICSWT
RSQPGFLNRQIITLLSSLDVKDAIFWEMQKEMLTRLDKILVNSDVAFDVVTASCGEAGNT
VAIMLSAGFKPQSEPHLRGMLSSIRAAQLGDLRNKARIFVPSGRWLMGCLDELGKLEQGQ
CFIQVSSPSLENCFVKHGPEFSDIKKNLQVIKGLVIIAKNPCLHPGDVRILEAVDVPGLH
HLYDCLVFPQKGDRPHPNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYDPAEAKQLG
RPVKHADIVEFFSKHMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKT
GKLVTMPFDLKPKMYPDFMGKEAFQSYESKKILGKLFRQVKDCDAEGGESSGLEYVPENI
PYDTNLEIPGYEDFIDDTWSLKCSYDGQLIGLLGQYKVNREEEVVSGHIWSMPKYSSKKQ
GELKERLKHAYNTLRKEFRNVFEQMGPNFDLLSNDEKNTIYERKASAWYRVTYHPQWVTR
SLELQLPDAASNSVMLSFAWIAADYLARIKIRHRGMQRSDSTKPINSLGRYLVNKI
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgggatcagagggttctgaaatgactctagtagtgactcaaattagtgttggtgggttc
gacaacaatgtcaatgcgaaaaagctttcggaatatctggaagaacaagttggacaagtg
tggagatgtagattaaagacttcatccactcctcccgagtcttacccagtttatgacatt
gatgcagagaaggtgcggagaatgaacaattacgaaaaagtggaacctcatgctttcgtt
cattttgcatcttcagggtcagcaaagaatgctcttgctgctgctaggcgcgatgaactc
ttattagagaagcctctgaaggtaagtttgggtcctgagaatttccataagatgaaccag
aggagaagtgataccctgccgtataagttttcggatgttaatgtagaaattggagcactg
gttagtagtgatgattttgtggttggttggaggggacctcatacgggtgttaactttctt
gtggacccattcgatgggacatgcaaaatactcttcacaaaggatactgttttcggtttc
aagggtgaaggaagacatgctgttataaaatgcaatttcaagattgagtttttgctgagg
gagatcaatgaaataaaggaatacaaagacttctcgtctttggtaatattgttacatctg
gcttcagctccattggttttctacagaactgctgatgacgatattgaagagtcggtagca
tttgatttattggacgatgacgatcagtggatccgaaccacagatatcacatgtagtgga
gccattggtaggttaaatacctaccgtatttcaattcgacctcgaaatggtcctagtttt
aacaaggccatgaattatttcaagtcaagtagggtgcccgtggtggaacagcgtatcggg
cagaggctccgggtgagagatgagcctgattttggggtttccatgtcagaacctttcttc
tgctttcataatcatgaaggcataagctttaaggttctgttcatggtaaatgcggttatg
cacaaaggcataattaatcagcatcagatgactgctgagtttttttcattgcttagaacg
catgaggagggggtcaatttatctgcactgaagcatatcttttcttataaaagacccgtc
aatgatgctattcataagttgtcacgcatccagagatggctgtttaataatcctaacctt
ctcgagagaactggacagttggatgacattgtagaggttagaaggttggctattacccct
accaaagcatattgtcttccaccgactgtggagctatccaatagagtccttaggaagtat
aaacatgtttcagatcgatttttgcgagttacgttcatggatgagggcatgcgtaacctg
aataggaaggttctgacatactatgctgctaacattgtgagagaaattacatcaaattct
aatccccagagaactgcaatcttccaaagggtgaaaagtatgctgattaatggattttat
ctgtgtggtcggaaatactcctttttggcattctcagctaaccagcttagggatcgttct
gcctggttttttgcagaaaccccggaaattagggtgcccaacatcataaactggatgggg
atgttcagtaacaggaatgttgcaaaatgtgctgctaggatgggacagtgcttttcatca
acctatgcaacagtggaagtccttccaagcaaggttaactctgagcttccagatatagaa
agaaatgactatgtcttttctgatggaatcggcatgatgtcagaagatctagcaatagaa
gttgcggagaagttgcaattgagtgtcaatcctccttgtgcttatcagataaggtatgct
ggttataaaggtgttgtcacatgttggccggggaagaatgatggtttcagcctttctctg
agaacaagtatgaagaaattcgactcgaatcacactatccttgaaatctgctcttggacg
agatcacaacctggttttctgaatcggcaaataataaccttgctctcgtccttggacgtt
aaggatgcaatattttgggaaatgcagaaagaaatgttaacaaggttggataagatactt
gtgaattcggacgtggcttttgatgtcgttacagcttcatgtggtgaggctggaaataca
gtggctataatgttgagtgcgggttttaaacctcaaagtgagcctcatttaagggggatg
ttgtctagcattagagctgctcaacttggcgacctcaggaataaggcaaggatatttgtt
ccttcaggaaggtggttaatgggctgtttggatgaactcggtaaacttgagcaaggccaa
tgctttattcaagtgtcaagcccttctttggagaattgttttgttaagcatggcccagag
ttttctgacatcaagaaaaatcttcaagtgattaagggcctcgttataattgcaaagaac
ccgtgtcttcatcccggggatgtgaggattctggaggctgtagatgttcccggtttacac
catctctatgattgtctggtcttccctcagaaaggggacaggccacatccaaatgaagca
tcagggagtgaccttgacggtgacctctactttgtgacttgggatgaaaatctcatccca
cctagtaagaaaagctggatgccaatggcatatgatcctgcagaagctaaacagttgggt
cgtccagttaaacatgcggacatagtagaatttttctcaaagcacatggttcaagagagt
ctaggagaaatctgcaacgcacatgtggttcatgccgacctaagtgaatttggagctatg
gatgagaagtgccttaaattggcagagcttgctgctctagccgttgatttccctaaaacc
ggaaaacttgtcaccatgccatttgacctcaaaccaaaaatgtatcctgacttcatgggg
aaagaggcatttcaatcgtacgagtcaaagaaaattttgggcaaattatttaggcaagtg
aaagattgtgatgcagagggtggagaatcttctgggcttgagtatgtccctgaaaacatc
ccatatgatactaatctcgagatcccgggatacgaagatttcatagatgacacatggagc
ctcaaatgttcttatgatggtcagttgattggtcttttaggacaatacaaagttaacagg
gaggaagaggtggtttctggacatatatggtccatgccaaagtacagttctaagaagcaa
ggggaattaaaagagaggctgaagcacgcatataatacgttgaggaaggagttcaggaat
gttttcgagcagatggggcctaattttgatctgctttccaatgatgagaagaatactatc
tatgaaagaaaggcatccgcatggtatcgggtcacctatcatcctcaatgggtgactaga
tcactggagttgcaattgccagatgctgcctcaaatagtgttatgttaagttttgcttgg
attgcagcagattaccttgctcgaattaaaattaggcaccggggaatgcaacgttctgac
tctaccaagcctattaattccctcggaaggtatcttgttaacaagatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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