KEGG   Capsicum annuum (peppers): 107875471
Entry
107875471         CDS       T04646                                 
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial isoform X2
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cann03016]
    107875471
Enzymes [BR:cann01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     107875471
Transfer RNA biogenesis [BR:cann03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    107875471
 Prokaryotic type
    107875471
SSDB
Motif
Pfam: Lactamase_B_4 Lactamase_B_2 Lactamase_B
Other DBs
NCBI-GeneID: 107875471
NCBI-ProteinID: XP_016577690
Position
6:223846574..223853875
AA seq 799 aa
MTNPENNVHTNTKAYVQILGTGMDTQETSPSVLLCFDKERFIFNAGEGLQRFCMEYKIKL
SQVDHICLTRVCSETAGGLPGLLLTLAGMKDESPQSAGKVQIWGPPNLNLLVNAMKTFVP
HAVMKNKNCIPQSGSALVPPLHAEELRADGKFKAVSISAILLSPTHFAGSHFSPNDTSIV
YICKLHDITGKVDKDKAKACGLNPGRKLGQLQKGFSVKSDFLDIEVHPDDVIGPTIPGPI
VLIVDCPTEPHAQELLSAQALEAYYSDSQSNSPDTTKVVNCIIHLGPATVINSPVYEKWM
GKFDSAQHIMARTPRKHETTPILVSSAKIGTRLHYLCPQLFPAPSLPSVGDDVGTPHIKG
SACGIFAENLLKFTLRPPRDMGLDRSSVENPTTSSVFIEELLSEIPEIADAAKNISKFWH
KPKDEVELSNRQDSGDVVTEEPSKFSAPRCLENVQRDDLEIVFLGTGSSVPSKYRNVSSI
HVNLFSKGGLLLDCGEGTLAQLKRRYGIIGADSAVRNLKCIWISHIHADHHAGVARILAL
RRDLLKGVAHDRILVIGPKQVGEFLMEYIKLEDLDMLFLDCKSTTVAAWDNMEADSMYVE
SRDHTLLTSLSEDSPLQHCSKKMKLSTPVDDITLLKCFRKVLSEAGLVRLISFPVVHCPD
TEAFGVILESAERMNHDKVVPGWKVVYSGDTRPCSQVIEASLGATILIHEATFEDGLVEE
AIARNHSTIKEAIEVGDSAGAYRVILTHFSQRYPKVPALDEVSMQTTCIAFDLMSVNLAD
LPVLPKVLPYLKLLFRNSG
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgactaaccccgaaaataatgttcacactaatacgaaagcctatgtccagattttgggg
acaggaatggatacccaagaaacatccccatctgttctgctctgctttgacaaagaaaga
ttcatatttaacgctggagagggattacaacgcttctgcatggagtataagataaaatta
tctcaggtagaccacatatgtctcactcgtgtatgctcagagacagcaggtggacttcca
ggattgctattgactttggctggcatgaaagatgaaagtcctcaaagtgctgggaaagtc
cagatatggggtcctccaaatctaaatttattggttaatgcaatgaagacttttgtccct
catgctgttatgaagaataaaaattgcatcccgcaaagtggatctgcattagttccccca
ttacatgcggaggagttgagagctgatggcaagttcaaggcagttagtatatcagctatt
ctcctatcaccgactcactttgctggatcacattttagtccaaatgatacctccattgta
tatatttgtaaactacatgacatcacggggaaagttgacaaagataaggctaaagcttgc
ggactcaatccagggagaaagcttggacaactgcagaaggggttcagtgtgaagtcagat
tttctggatatcgaggtccatccagatgatgttataggtccaactattcctggtccgatt
gtactgattgttgactgtccaacagaacctcatgcacaagagttactctctgcacaagct
cttgaagcctattactctgattcccaaagcaactccccagataccaccaaggttgtgaac
tgcatcattcatctgggccctgctactgtcatcaacagtcctgtttatgagaaatggatg
gggaaatttgattctgcccaacatattatggcaagaactccaaggaagcatgaaacaact
ccaattctagtatctagtgctaaaataggtacaagactgcattatttgtgtcctcagctt
tttccagctcctagtcttccttctgttggtgacgatgttggaacacctcatataaagggt
tcagcttgtggcatatttgctgaaaatctcttaaagttcaccttacgtcctcctagagat
atgggattggacagatcaagtgttgaaaatccgacgacctcctcagttttcattgaagag
ttactttcagagattcccgagattgctgatgcagctaagaacataagcaaattttggcac
aaacctaaagatgaggtggaattatccaacaggcaggacagtggtgatgtcgtgactgaa
gaaccttcaaaattctctgcccctaggtgtctcgagaatgtacagagagatgatctggag
attgtttttcttggcaccggttcttctgtaccttcaaaatatcgaaatgtcagttccatc
catgttaatcttttctctaaagggggtttactccttgattgtggagaaggaaccctggca
caactcaagaggagatatggcattattggtgcagacagtgcagttagaaatcttaaatgc
atttggatttcccatatccatgctgatcaccacgcaggtgtggcacggatacttgcttta
cgacgtgatttgttgaagggagtagcccatgatcgcatactggttattgggccaaaacag
gttggggagtttctcatggaatatataaaattagaagatctagacatgttgtttctcgac
tgtaagagcactacggtggctgcatgggataatatggaggccgactctatgtatgttgaa
agtagagatcatactctgttgacttctctttctgaagacagtcctctgcagcactgttcg
aaaaaaatgaagctaagcactccagttgatgacataacattgctaaagtgtttcaggaaa
gttctcagtgaagcaggtctagtgagactcatcagcttccctgtcgtacactgtccagac
actgaggcgtttggtgttatcttggaatcagcagaaagaatgaatcacgacaaagtagta
ccgggttggaaggttgtgtattctggtgacacgaggccatgctcgcaagttatagaagca
tctcttggtgcaactatacttatacatgaggcaacatttgaggatggcctggtggaggag
gctatagcaagaaatcacagcacaatcaaagaagctatagaagtgggagattctgctggt
gcataccgcgtaatattaacacacttcagccaaagataccccaaagtacctgcacttgat
gaagtgagtatgcaaacaacttgtattgcttttgatctaatgagtgtaaacctagcagat
ttgccagtgctacctaaggttcttccctacctcaaattgctcttcagaaacagtggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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