KEGG   Cellulophaga algicola: Celal_4251
Entry
Celal_4251        CDS       T01404                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cao  Cellulophaga algicola
Pathway
cao03030  DNA replication
cao03430  Mismatch repair
cao03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Celal_4251
   03430 Mismatch repair
    Celal_4251
   03440 Homologous recombination
    Celal_4251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cao03032]
    Celal_4251
   03400 DNA repair and recombination proteins [BR:cao03400]
    Celal_4251
Enzymes [BR:cao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Celal_4251
DNA replication proteins [BR:cao03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Celal_4251
DNA repair and recombination proteins [BR:cao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Celal_4251
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 DNA_pol_A_exo1 Rv2179c-like GIY-YIG
Other DBs
NCBI-ProteinID: ADV51492
UniProt: E6X4A9
Position
4857055..4858425
AA seq 456 aa
MYAILDIETTGGKYNEEGITEIAIHKFDGHQVVDQFISLVNPEKEIQPFVVNLTGITNKM
LVTAPKFYEVAKRIVEITEGTVLIAHNAQFDYRILRTEFRRLGFNFERKTICTVELAQKL
LPEAESYSLGKLVRSLGIPVSDRHRANGDALATLKLFKLLLSKDLDKTIVKSVLKAETLG
ELSPRQLDIVDDLPSEVGLFYMHNKDGEIILLNKSNNIKKRVNQYFTNSGNRARRIQKET
RKVTFEKTGNELIALLKENEELGRNKPKYNPFHKRKLFTFGVYASLNDQGYLQLKAEKLT
HTIHQRITTFNSLIAAENFLHAVRDEFQLCNKINGLSQAKTNCSKYDEGTCLGACITKED
TETYNHRVKELIQKYSLTEKNIAIIDKGRILGEKSVILIKDGVLKGLGFCDLNYQINNLP
ILESIITPMEGNENTNHIIESYLRKRKVQKIIDIKE
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtacgcaatattagatattgaaactactggaggaaaatataatgaagaaggtatcaca
gaaatagctattcataaatttgatgggcaccaagtggtcgatcaatttattagcctagta
aatcctgaaaaagagattcaaccttttgtagttaatttaacaggaatcactaataaaatg
ttggttaccgctcctaaattttatgaagtagcaaaacggattgtcgaaattaccgaaggc
actgttttaattgcgcataatgcacagtttgattaccgaatactacgcacagaatttaga
agactaggctttaattttgaacggaaaacgatctgtactgtagaattagctcagaaatta
ttacccgaagcagaatcctatagccttggtaaactggtgagatctctcgggattcctgtg
agcgaccgccatagagccaacggtgatgcgctagccaccttaaaactttttaaattatta
ctttctaaagatttagacaaaactattgttaaatctgtcttgaaagcggaaactcttggt
gaattatccccaaggcaactagatatagtagacgatttaccttctgaagtggggttattt
tatatgcacaataaagatggagaaatcatcttactgaataaaagtaataatattaaaaaa
cgtgtaaatcaatattttacaaacagtggcaatagagcccgaagaatacagaaagaaaca
cgtaaagttacttttgaaaaaacagggaacgaactgattgcacttttaaaagaaaatgaa
gaattaggtcgcaacaaaccaaaatataatccctttcacaaacggaaactatttacattc
ggtgtatatgcttctttaaatgatcaaggatatttacaattaaaagcagaaaaattaacc
catacaatccaccaaagaattacaacatttaacagcttaattgctgcagaaaatttttta
catgcagtacgcgatgaatttcaactttgtaacaaaataaacggtttatcgcaagcaaaa
accaactgttcaaaatacgatgaaggcacctgtctaggagcctgtatcacaaaagaagat
accgaaacgtataaccatagagtaaaagaattaatccaaaaatatagcttaaccgaaaag
aatattgctatcatcgataaaggtagaatcctaggtgagaaaagcgttattttaattaag
gatggtgttcttaaaggcctcggtttttgtgatcttaactatcaaataaataatttacct
atcttagaatcgattattactcctatggaaggtaatgaaaataccaatcacataattgaa
tcctatttacgcaaaagaaaagttcaaaaaataattgacattaaggaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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