KEGG   Capnocytophaga sp. FDAARGOS_737: FOC45_09545
Entry
FOC45_09545       CDS       T06329                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
capf  Capnocytophaga sp. FDAARGOS_737
Pathway
capf00470  D-Amino acid metabolism
capf00550  Peptidoglycan biosynthesis
capf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:capf00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FOC45_09545 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FOC45_09545 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:capf01011]
    FOC45_09545 (murD)
Enzymes [BR:capf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     FOC45_09545 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:capf01011]
 Precursor biosynthesis
  Amino acid ligase
   FOC45_09545 (murD)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD_N MurD-like_N PGK DAO Pyr_redox_2 POR FAD_oxidored
Other DBs
NCBI-ProteinID: QGS18498
UniProt: A0A6B8T7S1
Position
2178311..2179645
AA seq 444 aa
MKRLVILGGGESGVGTAILAKQKGWSVFLSDRGALKPQYRDILSRQNIDYEEGSHDEARI
LAADCIMKSPGIPDKADIIKKAREKQIPIISEIEFASQYTHSTIVAITGSNGKTTTTLLT
HHIFKQAGLEVGLGGNIGYSFAELVAHSNPPYYVLEISSFQLDGIEHFAPHIAVLLNITP
DHLDRYDYKFENYIASKFRIAMNQTANDYFIYDADDPVINDWLTTHPLKPKCIGFSIEKE
LSEGAFLKDNKIHIMLENQTTVIDVEEISLKGKHNIKNTMAAAVAARLVNIRNASLRESL
KGFQGAAHRLEEVKVVEGVTYINDSKATNVNSVYFALDTIKTPIVWIVGGQDKGNDYNSL
LPYVHQKVKAIVCLGVDNTPILQSFYNVIDNMVETRSMEEAVKMAQRFATAGDTVLLSPA
CASFDLFKSYEDRGDQFKAAVAKL
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaaacgtttagtaatattaggcggtggcgaaagcggcgttggtaccgctattttagcc
aaacaaaagggctggagcgtcttcttatccgatagaggcgccctaaaaccccaataccgc
gacatcctatcccgccaaaacatcgactacgaagaaggctctcacgacgaagcccgcata
ctcgctgccgactgcataatgaaaagccccggcatccccgataaggccgacatcatcaaa
aaagcacgcgaaaaacagatacctattatttccgaaatagagttcgccagccaatatacc
catagtaccattgtagctataaccggcagcaatggcaagaccaccaccaccctactcacc
caccacattttcaaacaagcagggttagaagtaggcttggggggcaatataggctatagt
tttgccgagttggtagcccatagcaatccgccttattatgtgctcgaaatcagcagcttt
cagttagacggcattgagcatttcgcaccccatatagccgtgttgctcaacattaccccc
gaccatttagacaggtacgattataagtttgagaattacatagcctctaagtttcgcatt
gctatgaaccaaactgccaacgattactttatttacgatgccgatgaccccgtgataaac
gactggctcaccacccaccccctaaaacctaagtgtataggtttttcaatcgaaaaagaa
ctgagcgaaggagctttcttaaaagacaacaaaatacatattatgttagagaatcaaacc
actgtaatagacgtagaagaaataagcctaaaaggaaaacacaatatcaaaaatactatg
gcggcagcagtagcggcgcgcttagtaaacatccgcaacgcatcactacgcgaaagcctc
aaagggttccaaggggcagcacaccgcttagaagaggtgaaagtcgttgagggcgtaact
tatataaacgattctaaggctaccaacgtcaattcagtgtacttcgccttagacactatc
aaaacccctatcgtatggatagtaggcggacaagacaaaggcaatgactacaactctctg
ctaccttacgtacatcaaaaagtaaaagccatagtatgcttaggcgtagacaatacccct
atattacagtctttttacaatgtcatcgacaatatggtagaaacccgttctatggaagag
gctgtaaagatggcgcaacgctttgctaccgctggcgacaccgtattgttatcacctgct
tgtgcgagcttcgaccttttcaaaagttatgaagaccgtggcgatcagttcaaagctgca
gtagctaaactctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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