KEGG   Candidatus Paracaedimonas acanthamoebae: IM40_00010
Entry
IM40_00010        CDS       T03240                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
caq  Candidatus Paracaedimonas acanthamoebae
Pathway
caq03030  DNA replication
caq03430  Mismatch repair
caq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:caq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IM40_00010
   03430 Mismatch repair
    IM40_00010
   03440 Homologous recombination
    IM40_00010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:caq03032]
    IM40_00010
   03400 DNA repair and recombination proteins [BR:caq03400]
    IM40_00010
Enzymes [BR:caq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IM40_00010
DNA replication proteins [BR:caq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IM40_00010
DNA repair and recombination proteins [BR:caq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IM40_00010
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AIL12264
Position
1462..2571
AA seq 369 aa
MQLTLERNQFLKALSHAQSVVEKRTTVPILAHVLLEAESGQLRLTSTDLELAIVETVPAK
IQKAGGTTVSAQLLHDIVRKLKDGSDIQLSLENEGSHLQIISGRSEFKLACLPPEDFPAI
NTTDLPYRFKVNGKNFLNLLEKARFAMSTEETRYYLNGIYLHPVASREIRAVATDGHRLA
RLSLAMPQDLPDFPGIILSRKTVNEAMKILGETEDDIEVSLSETQVSFKFNHVYLTSRLI
DGSFPDYEAIIPAHNEKTLKMSMTAFSEAVDRVATVSTEKSRSVKLSINTNKIILTASNS
EFGSAVEELEVEYAASPLELGFNARYLLDLSHQLSNTETEFAMSDSATPVVVREVDNNDA
FYLLMPMRV
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcaactgaccctcgaacgtaatcaatttttaaaggctttaagtcatgctcaaagtgtt
gttgaaaaacgcacgacagttcctattttagcccacgttcttttagaggcggaaagtggt
caattgcgtttgacctcaactgaccttgaattagctattgttgaaaccgttcctgccaaa
attcaaaaagcaggaggaacaacggtttctgcacaacttctgcatgatatcgtgcggaaa
ttaaaagatggctctgatattcaactttcgcttgaaaatgagggatctcatttacaaatt
atttcaggccgttctgagtttaaacttgcgtgtttgccgcctgaagattttcctgccatt
aatacgactgatttgccctaccgatttaaggtgaatgggaaaaatttcttgaatcttctt
gagaaggcacgttttgccatgtctacagaagaaactcgttattatttaaatgggatttat
ttacaccctgtcgcatctcgtgagattcgtgccgttgcaacagatgggcatcgtttagca
cgtttatctcttgcaatgcctcaagaccttcctgattttccaggtattattctttcacga
aagacagtcaatgaggcgatgaaaattttaggtgagacagaagatgacattgaagtttca
ctctccgagacacaagttagctttaaatttaatcatgtttatttaacatctcgtttaatt
gatggttctttcccggattatgaagccattattccggctcataatgaaaaaacattaaaa
atgtcaatgacagcgttttcagaagctgtggatcgtgttgccaccgtatcaacagaaaaa
tctcgcagtgttaagctgtcaatcaatacgaacaagattattttgaccgcaagtaattcg
gagtttggaagtgctgtggaagagctcgaagttgagtatgcagcgtctccgctcgaactt
ggatttaatgcgcgttatttgttagatctctctcaccaattaagcaatactgaaaccgag
tttgcaatgtcagattccgcaacacctgtggttgtgcgtgaggtagataataatgacgct
ttttatctgttaatgcctatgcgagtataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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