KEGG   Candidatus Paracaedimonas acanthamoebae: IM40_09055
Entry
IM40_09055        CDS       T03240                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
caq  Candidatus Paracaedimonas acanthamoebae
Pathway
caq03030  DNA replication
caq03430  Mismatch repair
caq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:caq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IM40_09055
   03430 Mismatch repair
    IM40_09055
   03440 Homologous recombination
    IM40_09055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:caq03032]
    IM40_09055
   03400 DNA repair and recombination proteins [BR:caq03400]
    IM40_09055
Enzymes [BR:caq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IM40_09055
DNA replication proteins [BR:caq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IM40_09055
DNA repair and recombination proteins [BR:caq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IM40_09055
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AIL13594
Position
1693112..1693822
AA seq 236 aa
MREIVLDTETTGFEPSDGHRLVEIGCIELMNFVPTGAIFHKYINPEREVPQEAFNVHGLS
YEFLKDHPRFEEVHLQFLDFIGGSPLVIHNARFDMKFLNAELGRLNQPVLPFERAIDTLA
LAKSLFPGSPASLDALCKRFEIDNSNRIKHGALLDAELLAEVYLELKGGRQPTLNLATKS
INSGLKPIEKKFYSARPFEIPADDLKLHEAFLDKLKNPVWRSLESHTGSGKAQGNQ
NT seq 711 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgtcctggataccgaaacaacaggatttgagccgtctgacggacatagg
ttggttgaaattgggtgtattgagctcatgaattttgtgccgacaggcgccatttttcac
aagtatattaatcctgaacgagaggtaccccaagaagcgtttaatgttcatggtctttca
tatgaattcctgaaagatcatccaagatttgaagaagttcatctgcaatttcttgatttt
attgggggcagccctttggtcattcataatgctcgctttgatatgaagtttttgaatgca
gagcttgggcgtcttaatcaacctgttctgccctttgagagggcaattgatacgttggcg
ttagcaaaaagtttatttccaggatcgcccgcgagtcttgatgctttatgtaagcgtttt
gagatcgataattcaaatcgtatcaagcacggagctcttttagatgctgagcttttggct
gaagtttaccttgagcttaaaggggggcgccaacccacccttaatttagcgacgaaatca
ataaactcaggccttaagcctattgagaagaaattttattcggcacgtcctttcgaaatt
cctgcagacgaccttaaacttcatgaagcttttttagataagcttaagaacccagtgtgg
cgttctcttgagagccatactggttccggtaaagctcaaggaaatcaatag

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