KEGG   Corynebacterium aurimucosum: cauri_1062
Entry
cauri_1062        CDS       T00887                                 
Symbol
rho
Name
(GenBank) Transcription termination factor
  KO
K03628  transcription termination factor Rho
Organism
car  Corynebacterium aurimucosum
Pathway
car03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:car00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    cauri_1062 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:car03021]
    cauri_1062 (rho)
   03019 Messenger RNA biogenesis [BR:car03019]
    cauri_1062 (rho)
Transcription machinery [BR:car03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     cauri_1062 (rho)
Messenger RNA biogenesis [BR:car03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     cauri_1062 (rho)
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N Spore_III_AA AAA_25 NACHT AAA_22 SAP
Other DBs
NCBI-ProteinID: ACP32657
UniProt: C3PFQ3
Position
1183680..1185620
AA seq 646 aa
MSDTDKTAAQDLASLKLPELRKLAAERGLRGVSGLRKGDLITALTTGQVPARGAKAAAEG
EAKDAQPRRAARKASRPAGAADQAPEQPEQDKKRQQDQPQQQSENSRKGEDGAQESERKD
SHDEQRYESRSQARRARRNRARRQEREAREESKGNGNDNGAEGNNAKSDNNGKSEDNQSR
GGKNSENGDHDNGGNGHNGGNNGGGQNNNRRDNHRNDDDNNGGGGRRNRRNRRNRRGRDR
DGGGNGGNDLQIREGDEVQVVGGILEVVDNNVAFLRTTGYRAASSDVFVNNNLVRRLGLR
SGDALTGKVKVSGPTHTHGNGRNRRKYNQLVEVDTVNGLDPSTAKERPDFAKLTPLYPNQ
RLRLETDPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPECYLMV
VLVDERPEEVTDMQRSVNGEVIASTFDRPPSEHTSVAELAIERAKRLVEQGKDVVVLLDS
ITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGST
GDTVIFEEFKGTGNAELKLDRAISERRIFPAVDVNPSGTRKDELLLVPEEARIMTKLRRI
LSGLDSFAAIDLLIKQLKKTRSNGEFLMQVASSAPMAADTDEEDYK
NT seq 1941 nt   +upstreamnt  +downstreamnt
gtgagcgatacggacaagaccgcagcacaggatctcgcatccctgaagctgccggaattg
cgcaagctggctgcggagcgcggacttcgcggcgtttctggactgcgcaagggggatctc
atcaccgcactgaccaccggccaggttccggcacgcggcgcaaaggctgctgccgagggc
gaggctaaggacgcacagccgcgtcgcgccgcccgcaaggcctcgcgccctgccggtgct
gctgaccaggcccccgaacagccggagcaggacaagaagcgccagcaggaccagccgcag
cagcaatccgagaattcccgcaagggcgaggacggtgctcaagaatccgagcgcaaggac
agccacgacgagcagcgctacgagtctcgctcccaggcccgccgcgcccgccgtaaccgt
gcgcgccgtcaggagcgcgaggcccgcgaagagtccaagggcaacgggaatgacaacggc
gccgagggcaacaatgccaagtcggacaacaacggcaagtccgaggacaaccagtcccgc
ggcggaaagaactccgaaaacggtgaccacgataacggtggcaacggtcataatggcggc
aataacggcggtggccagaacaacaaccgccgcgataaccaccgcaacgacgatgacaac
aacggtggcggtggccgccgcaaccgccgcaaccgtcgcaaccgtcgcgggcgtgaccgc
gatggcggcggcaacggtggcaatgacctgcagatccgtgagggtgatgaagtacaggta
gtcggcggcatcctcgaggtcgtggacaacaacgtggccttcctgcgcaccaccggttac
cgtgcggcgagctccgatgtcttcgtcaacaacaacctggtgcgccgtctgggcctgcgc
tctggcgacgccctgaccggcaaggttaaggtctccggcccgacccacacccatggcaac
ggccgcaatcgccgcaagtacaaccagctggtggaggtcgacaccgtcaacggcctcgat
ccgtccaccgcgaaggagcgcccggacttcgccaagctcaccccgctgtacccgaaccag
cgcctgcgcttggagacggacccgaagatcctcaccactcgcgtcatcgacctcatcatg
ccgattggtaagggccagcgcgcgctcatcgtctccccgccgaaggccggtaagacgacg
atcctgcagaacatcgccaacgccatcgccacgaataacccggagtgctacctcatggtg
gtcctagtggacgagcgccccgaagaggtcacggacatgcagcgcagcgtcaacggtgag
gtcattgcctccaccttcgaccgcccgccgtcagagcacacctccgtggcggagctggct
atcgagcgcgccaagcgcctggtggagcagggcaaggacgttgttgttctgctcgactcc
atcacccgcctgggccgcgcctacaacaactcctccccggcgtcgggccgcatcctgtcc
ggtggtgtggactccaacgccctgtacccaccgaagcgcttcttgggcgctgcccgcaac
atcgagaacggcggctcgctgaccatcatcgctaccgcgatggtggagaccggctccact
ggtgacaccgtcatcttcgaggaattcaagggcaccggcaacgccgagctcaagcttgac
cgcgccatctccgagcgccgcatcttcccggccgtggacgtcaacccctccggtacccgc
aaggacgagctcctgctcgtcccggaggaggcacgcatcatgaccaagttgcgccgcatt
ctctccggcctggactccttcgccgccattgacctgcttatcaagcagctcaagaagacc
cgctccaacggcgagttcctcatgcaggtcgcttcgtccgcgcccatggcggcagatacg
gacgaggaggactacaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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