KEGG   Collimonas arenae: LT85_0922
Entry
LT85_0922         CDS       T03512                                 
Symbol
cmEC
Name
(GenBank) RND efflux system
  KO
K18139  outer membrane protein, multidrug efflux system
Organism
care  Collimonas arenae
Pathway
care01501  beta-Lactam resistance
care02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:care00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LT85_0922 (cmEC)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    LT85_0922 (cmEC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:care02000]
    LT85_0922 (cmEC)
   01504 Antimicrobial resistance genes [BR:care01504]
    LT85_0922 (cmEC)
Transporters [BR:care02000]
 Other transporters
  Pores ion channels [TC:1]
   LT85_0922 (cmEC)
Antimicrobial resistance genes [BR:care01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    LT85_0922 (cmEC)
   Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
    LT85_0922 (cmEC)
   Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
    LT85_0922 (cmEC)
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: AIY40080
UniProt: A0A0A1F8H4
Position
complement(1040445..1041872)
AA seq 475 aa
MFNTLPKHLTGTLLLAGVLSGCTLAPTYVRPEAPVAGSYPAAAEGKAQLDAVELGWREFF
PDQRLQALIASALENNRDLRTAALNIEEARAQYGITAADALPNFNGNFSRTRGRTASDQL
VPGQPAVGTAYAVGLNMTAFELDFFGRVRSLKDAALATYLATEEAKQSAQISLISQVAQA
YLTEQSYAEQQRLAQQTLDSRLDDYKLDKMRFEVGASSALDLRNSETLVQSARVSLATLV
RQREQATNALVLLVGKPLGDLPAPQSLSDEKIVTDIPAGLPSDLLNRRPDIRQAEQQLRS
ANANIGAARAAFFPTISLTAGIGNSSTSLGSLFSAGSRTWSFVPQLTLPIFEGGRNRANL
SLSEIRKNLAIANYEKTIQSAFREVSDALVARGTLEEQLAAQDAFLKAQEERVKLTDLRY
KNGIASSTDRLNAQRDLFSAQQSLIQTRQLRLNNAIDLYRSLGGGLNENTVTTKS
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtttaacactttacccaagcacttgaccggcaccctgctgctggcaggcgtcctctcg
ggttgcaccttggcgccgacctacgtgcggccggaggcgcctgtagctggcagctacccg
gctgctgccgaaggcaaggcgcaactggatgcggtggaactcggttggcgcgagttcttc
ccggaccagcgcctgcaggcgttgatcgcatccgcgctggaaaacaatcgtgacttgcgt
accgcagccttgaacatcgaggaagcgcgggcgcagtacggcatcaccgccgccgatgcc
ttgcctaactttaacggcaacttcagccgtacccgcggccgtaccgcctcggatcaactg
gtccctggccaaccggcggtaggtaccgcctacgcggtcgggctgaacatgacagcattc
gagctggatttctttggccgcgtgcgcagcctgaaagatgcagcgctggcgacctatctg
gcaacagaagaagccaagcaatcggcacaaatcagtttgatttcgcaggtcgcccaagct
tatctgacagagcagtcatatgccgagcaacaacggttggcgcagcaaaccctggatagt
cgtctggatgactacaagctcgacaagatgcgctttgaagtaggcgcatcttccgcgctc
gacctgagaaactcggaaaccctggtccaatccgcccgcgtatcgctggcgacgctggtg
cgtcagcgcgagcaagccaccaacgccctggtgctactggtcggcaagccattgggcgac
ctgccagcgccgcaatcgttgtcggatgaaaaaatcgtcaccgacattcccgccggcctg
ccatccgacttgctgaaccgccgtcccgatatccgccaggctgagcagcagttgcgctcc
gccaatgcaaatatcggcgctgcgcgtgcggctttcttcccgaccatttcactgacggct
ggcatcggcaattccagcacctcactgggcagcctgttctcggcaggcagccgcacctgg
tcattcgtaccgcaattgacactgccgatttttgaaggcggacgcaaccgcgccaatctg
tcgctgagcgagattcgcaagaatctggcgattgccaattacgaaaaaaccatacagagc
gccttcagggaagtttccgatgcgctggtcgctcgcggcacactggaagagcagttggcc
gcgcaagacgccttcctcaaggcccaggaagaacgggtcaagctgaccgatttgcgctac
aagaacggcatcgccagttcaaccgaccgtttgaatgcccagcgcgatctgttctcggcg
cagcaatccttgattcaaacacggcagctgcgtttgaataatgcgatcgatctgtatcgg
tcgttgggcggtgggttgaatgaaaatacggtgacaaccaaatcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (2)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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