KEGG   Collimonas arenae: LT85_1228
Entry
LT85_1228         CDS       T03512                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
care  Collimonas arenae
Brite
KEGG Orthology (KO) [BR:care00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:care03009]
    LT85_1228
Enzymes [BR:care01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     LT85_1228
Ribosome biogenesis [BR:care03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LT85_1228
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AIY40386
UniProt: A0A0A1F7A5
Position
complement(1374575..1375114)
AA seq 179 aa
MCQFSAHPSRPTLADYIKIPNIYPAGRLDADSEGLLLLTDDGKLQHNISHPALKQPKTYL
AQVEGIPDEATLARLRNGVNLGDFVTQPCQARLVQAPDWLWPRNPPIRERLDKSTSWLAL
TLTEGKNRQVRRMTAAVGLPTLRLVRIAIGQVSLQSHPLWPGDMQEIDPSDLSTLMTLR
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtgccagttctctgcacatcccagccgccccaccctcgccgactatatcaaaatcccc
aacatttatccggcgggacgtcttgatgcagacagtgaaggcctgctgctgctcaccgac
gacggcaagctgcaacataatattagccatcctgcgttgaaacagccgaagacttacctg
gcccaggttgaaggaattccagacgaagcgacactggcacggttgcgcaacggcgtgaac
cttggcgattttgtcacccagccttgccaggcacgcctggtacaggcgccggactggctg
tggccgcgcaatccgccgattcgcgaacggctcgacaaatccaccagttggctggcactg
accctgaccgaaggaaaaaatcgccaggtgcggcgcatgacggcggcggtcggtctaccg
accttgcgcctggtcagaatagccattggtcaggtatcgctgcaaagccatcctttgtgg
ccgggcgacatgcaggaaatcgatccgtccgatttaagcacattgatgacattgcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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