KEGG   Collimonas arenae: LT85_1894
Entry
LT85_1894         CDS       T03512                                 
Name
(GenBank) putative vgr-related protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
care  Collimonas arenae
Pathway
care03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:care00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LT85_1894
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:care02044]
    LT85_1894
Secretion system [BR:care02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LT85_1894
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: AIY41052
UniProt: A0A0A1FDW6
Position
2095886..2098399
AA seq 837 aa
MANLSAIGNSISQQSRLLKLDTPLGADVLLPHRVVAHDRLGRGYTYTLDVLSLQSDIELK
QLIAQPVTLWIQQADKRSYLPVHGYVHQAGMLGHDGQFTVYQLAFSSWLHFLQYRQDARI
WQDKTTDDIISDVFGQHTQARGNFRFDLTQPAPSRSYCTQYESDWNFVMRLMEEEGWYSY
HEQKQDGSGHTLVITDSVHQLKPLAPEEIRFHRAGSNDEIDKITRWGGQRKLLSRQLSRV
TYDYKSPGNNKATSTYTLDGHGAVPNQLEVYEYTGNYTYLERDRGDKLAKIKVEAWESQA
KRYFVWSSVSRLAAGVGRWFSLADHTDHDRDSDQDRQFIVIGLHWYIENNLPLSTTVNHF
PGSLEQQIADAKQQTATSDKITNEQSGYCVNSIEVQRRTVEYRSPFEHHKPEMHAQIATV
VGPDSEEIYTDSLNRVKVKFPWNRLNPGDEKASCWVRVSYPNAGQGYGALNVPRIKQEVV
ITFLGGDPDRPLVTGRVYNGAQTPDWHTDGKLSGYKSKEYKGSGFTQLVMDDNTNQNRVQ
LYSSNTNAQLNLGYLVGQQGNTRQAFYGSGFSLNSDAFGAITTHQGLYISTFGRPGAQGS
QLDVREAHQQLEAGQNLTKSLSDTSSKANAEALDGQESLKKFTEATQDKYEGEGQQQANR
FKEPVLLAASPAGIGLATPKSTHIHSGENVTLSSGTDTNLAVGKSLVASIKEKLSLFVYN
GGIKLFAAKGKVEIQSQSDNLDIIAEKVLRLISTTDNIEIWAKKEITIGAGGSAIKINAS
GITDITNGQRIIHQGDFNLTGPKTVPFPMPTLPKSICVECLMKRAMGRSAFINKGTQ
NT seq 2514 nt   +upstreamnt  +downstreamnt
atggctaatcttagtgcaataggaaacagtatcagccagcaaagccgccttcttaaactg
gataccccgctcggcgccgatgtcctgcttcctcatcgcgtggttgcccatgaccgtctg
ggtcggggttatacctacaccctcgatgtgctgtccctgcagagcgatatcgagctcaag
cagttgatcgcccagccggtgacgctgtggatccagcaggccgacaagcgcagctacctg
ccagtgcacggctatgtgcatcaagccggcatgctcggtcacgacggccagttcacggtc
taccagctggctttttcttcctggctgcattttctccagtaccggcaagatgcccgcatc
tggcaagacaagactaccgatgacatcatcagcgacgtgtttggccagcacacgcaggca
cgcggcaatttccgcttcgatctgacgcagcccgcgccgtcgcgctcctattgcacacaa
tacgagagcgactggaatttcgtgatgcggctgatggaagaagaaggctggtacagctat
cacgaacagaagcaggatggctcaggccatacgctggtgatcaccgattcggtgcaccag
ttgaagccgctggcgccggaagaaatccggttccaccgcgccggcagcaacgatgaaatc
gacaagatcacccgttggggcggacagcgcaagctgcttagccggcaattgtcgagggtc
acctacgactacaaatctcccggcaataataaagccaccagcacctacaccctggacggt
catggcgcggtgccgaatcaactggaagtctacgaatacacgggtaattacacctatctg
gagcgggatcgtggcgacaaactggccaagatcaaggtcgaagcctgggagtctcaagcc
aagcgctactttgtctggtcgagtgtttctcgcctcgccgccggcgtcggtcgctggttc
agcctggcggatcatacggatcacgaccgcgattccgaccaagatcgccaattcatcgtc
atcggtctgcattggtatatcgaaaacaacctgccactgtcgacgacggtcaatcatttc
cccggcagtttggaacagcagattgccgacgccaagcagcaaaccgcgaccagcgacaag
atcaccaacgaacaaagcggttattgcgtcaacagcatcgaggtacagcgtcgtacggtg
gaataccgcagcccgtttgaacaccacaagccggagatgcatgcacagatcgccacggta
gtggggcccgacagtgaagagatttatacggattccctcaaccgcgtcaaagtgaaattt
ccatggaaccgcttgaaccctggcgatgaaaaagcgtcttgctgggtgcgggtcagctat
ccgaatgcagggcaaggttacggcgccctcaatgtgcctcgcatcaagcaggaagtggtg
atcaccttcctgggcggcgatcctgaccgtccgctggtgactggccgcgtctacaacggc
gcacagacgcccgattggcataccgatggcaagctgtcgggttacaaatccaaggaatac
aaaggcagtggatttacgcagctggtgatggacgacaataccaaccagaaccgggtccag
ctctatagcagcaataccaatgcccagctgaacctgggttatctggtcgggcagcaaggc
aatacccgccaggcgttttacggttcgggattttccttgaattcagatgcttttggggcc
attaccacccatcaggggctgtacatcagcaccttcggccgccccggtgcgcaaggatcg
caattggatgtgcgggaagcgcatcagcaactggaagctggtcagaatctcaccaaatcg
ttgtcggacaccagcagcaaggccaacgccgaggccctggatggacaggaatcgctgaag
aaattcaccgaagcgacgcaagacaaatacgagggcgaaggccaacagcaggccaatcgc
ttcaaggaaccggttctactggcggcatcgccagccggtattggtctggccacacccaag
agcacacatattcacagcggcgagaatgtgacgctgtcatcaggcaccgacaccaatctg
gcggtcggcaagagcctggtcgccagcatcaaggaaaaactcagtctgtttgtgtataac
ggtggtatcaaactgttcgcggccaaaggcaaagtcgagatccagtcgcagagcgacaac
ctggacatcattgccgagaaagtgctgcgcttgatttccacgacggacaacattgaaatt
tgggccaagaaagaaatcactatcggcgctggtggctcggcgatcaagatcaacgcctcg
ggaattactgatatcacgaacggccagcggattatccatcaaggtgatttcaacctgact
gggccgaaaaccgtaccattcccgatgccgacgctacccaagagtatatgcgtggaatgt
ttgatgaaacgcgcgatggggcggtccgccttcattaacaagggaacacaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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