KEGG   Clostridium argentinense: RSJ17_04700
Entry
RSJ17_04700       CDS       T05123                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
carg  Clostridium argentinense
Pathway
carg00300  Lysine biosynthesis
carg00550  Peptidoglycan biosynthesis
carg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:carg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RSJ17_04700
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RSJ17_04700
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:carg01011]
    RSJ17_04700
Enzymes [BR:carg01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     RSJ17_04700
Peptidoglycan biosynthesis and degradation proteins [BR:carg01011]
 Precursor biosynthesis
  Amino acid ligase
   RSJ17_04700
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase DegQ
Other DBs
NCBI-ProteinID: ARC83877
Position
861444..862916
AA seq 490 aa
MNIKDLLIKIDYDILKGNDNAEVCEIAYDSRRVTKKNSLFVCIEGFKEDGHKFIDDAIKN
GATSILVEKEIKINSENANVIKVKNARKVLSKISSAFYNEPSKELNLVGITGTNGKTSVS
IIISNILENLGRKVGTIGIIDNRIGNKILEVEKNTPTTPESLELQMLLRKMSEEKVQDVI
MEVSSMALELYRVDNCIFDIGVFTNLSQDHLDDHKTMENYKNAKLKLFTKCKYAVVNIDD
SVSKDIINTATAKIFTYGINNSADLMANDIRLSPDGARFKISFNSEEKEVVIKIPGLFSV
YNSLAAIAVCLHLGLILDDIILALQDIKTIRGRAEAINTEDGYTVIVDYAHSPDALKNIL
TTVKGFVRGKVITVFGCGGDRDKTKRPIMGKIAGENSQFCIITSDNPRTEEPLQILYNIE
DGIKETQCSYKKILDRKEAIYFAMDNAKLGDVIVIAGKGHETYQILKDRTIKFDDMEVVK
EYLKKKVSAE
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaatataaaagatttattaattaaaatagactatgatattttaaaaggcaatgataat
gcggaagtatgtgaaattgcttatgattcaagaagagttacaaagaaaaattcattattt
gtatgtatagaaggatttaaggaggatggccataaatttatagatgatgctattaagaat
ggtgctacttctatattagttgaaaaggaaataaagataaactctgaaaatgcaaatgta
attaaggttaaaaatgcaagaaaagtattatctaagatatcgagtgcattttataatgag
ccatcaaaagaattaaatttagttggaataactggcactaatgggaagacttcagtatct
attatcatttctaatatattggaaaatctaggccgtaaagttggtacaattggtattatt
gataatagaataggaaataaaattttagaagtagaaaagaatacgcctacaacaccggaa
tctttggaacttcaaatgctacttagaaaaatgtcagaggaaaaagttcaagatgtaatt
atggaagtttcctcaatggcattagaattatatcgggtagataattgcatatttgatata
ggggtttttacaaatttaagccaagatcatttagatgaccataaaactatggaaaattat
aaaaatgcaaaactaaagttatttacaaaatgtaaatatgctgtagtaaatatagatgat
agtgtatcaaaagatataataaatactgctacagctaaaatatttacctatggaattaat
aatagtgcagatttaatggcaaatgatataaggttatctcctgatggagcaagatttaaa
ataagttttaatagtgaagaaaaagaggtagttattaaaattccaggtttatttagtgtt
tataactctttagcagctattgcagtttgtcttcatttaggattaatacttgatgatata
attttagcactacaagatataaaaactataagggggagggcagaagcaataaatacagaa
gatggatatactgtaattgttgattatgcacatagtccagatgcattaaagaatatttta
actactgttaagggtttcgtaagaggtaaagttattacagtatttggctgtggtggtgat
agagacaaaactaaacgtcctataatgggaaaaatagcaggcgaaaattcgcaattttgt
ataataacatctgacaatcctagaacagaggaaccattacaaattctttataatattgaa
gatggaataaaagaaactcaatgttcatataaaaaaattttagatagaaaagaagctata
tattttgcaatggataatgcaaaattaggagatgtaattgttatagcaggaaaaggtcat
gaaacttatcaaattttaaaggatagaactatcaagtttgatgatatggaggtggtaaaa
gaatatttaaagaaaaaagttagcgctgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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