KEGG   Clostridium argentinense: RSJ17_14455
Entry
RSJ17_14455       CDS       T05123                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
carg  Clostridium argentinense
Brite
KEGG Orthology (KO) [BR:carg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:carg03032]
    RSJ17_14455
   03400 DNA repair and recombination proteins [BR:carg03400]
    RSJ17_14455
Enzymes [BR:carg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     RSJ17_14455
DNA replication proteins [BR:carg03032]
 Prokaryotic type
  DNA Topoisomerases
   RSJ17_14455
DNA repair and recombination proteins [BR:carg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RSJ17_14455
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Zn_ribbon_recom Toprim_4 HVO_2753_ZBP zf-ribbon_3 Toprim_2 HypA
Other DBs
NCBI-ProteinID: ARC85621
Position
complement(3044432..3046534)
AA seq 700 aa
MGQKLVIVESPAKAKTIKKYLGKNYIVEASMGHVRDLPKSQLGVDIDNNYEPKYITIRGK
GELLEKLKKEAKKSEKVYLATDPDREGEAISWHLAKALKISEDEKCRIEFNEVTKTAVKA
AIKNPRQINENVFDAQQARRVLDRLVGYEISPILWRKIRWGLSAGRVQSVALKIICDREK
EISEFIPKEYWTIECDVFKDNQKESFIIKLHSKDGEKIEISSKEESDKIIRDLQNGIFIV
KGIKNSEKNKNPLPPFTTSTLQQDAYRKLNFPTKKTMSIAQQLYEGIEIKGHGSIGLITY
MRTDSVRISDEAQENAKNFITDNFGEKYLPQSKRVYKGKKNTQDAHEAIRPTNVDITPEI
AKENLKEPQYKLYTLIWNRFMASQMASCILDSTSIEINNREYFLKATGSTVKFDGFTKIY
SNENEEEEKAIKMPKLSEGDEITPKNIEGKQHFTQPPAKFSEASLVKTLEENGIGRPSTY
APIISTLLERKYIERNKKVLDPTELGYIVNNLMSEYFKEIVDVEFTAAMENKLDSVEEGK
ESWKKIVDDFFIPVKKSIDIAEKEIAKITIEDEVTDIECDKCGRKMVIKHGRFGDFLACP
GYPECKNTKPLAAELDVPCPKCGSKILEKRSRKGNKFYGCSSYPECDFVSWFEPTSERCP
QCNEIMVKRYTKTKGDYLECINKDCKYKKEQNMQNNSTED
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgggccaaaaactagttatagttgagtcacctgctaaagcaaagacaataaaaaaatat
ttgggaaaaaattatatagtggaagcttcaatgggacatgtgagagatttgccaaaaagc
caattaggcgtagatatagataataattatgaaccgaagtatataactattaggggaaaa
ggtgagcttttagaaaaacttaaaaaagaggcaaaaaaaagtgaaaaggtttatttagca
acggaccctgatagagaaggagaagctatatcatggcatttagctaaagcacttaaaatt
tctgaagatgagaaatgtagaattgagtttaatgaagttacaaaaactgcagtaaaagca
gcaattaaaaatccaaggcaaattaacgaaaatgtatttgatgctcaacaagcaagaagg
gtattagatagattagtaggatatgagataagccctatactatggagaaaaatcagatgg
ggattaagtgctggtagagtacaatcagtagctttaaaaataatatgtgatagagaaaaa
gaaatatctgaatttatacctaaagaatattggactattgaatgtgatgtctttaaagat
aatcaaaaggaaagctttataataaaattgcatagtaaggatggagagaagattgaaata
tcttcaaaagaggaaagcgataaaataattagagatttacaaaatggaatctttattgtt
aaaggtataaaaaatagtgaaaagaataaaaatccgcttccaccatttactacaagtact
cttcaacaggatgcttatagaaaattaaattttccaactaaaaaaactatgtcaatagca
cagcagctttatgaaggtattgaaattaaagggcatggatctataggattaatcacttat
atgagaacagattctgttagaatttcagacgaagctcaagaaaatgcaaaaaactttatc
acagataattttggagagaagtatttacctcaaagtaagagagtatataaaggaaagaaa
aatactcaagatgctcatgaggctatcagacctactaatgttgatataactcctgaaata
gccaaagaaaatttaaaagagcctcaatataaattatatacattaatttggaatagattt
atggcaagtcaaatggcttcttgcatattagatagtacttctatagaaattaataataga
gaatattttttaaaagcaactggctctactgttaaatttgatggatttacaaaaatttat
agtaatgagaatgaggaagaagaaaaggctataaaaatgcctaaactaagtgaaggtgat
gaaattacacctaagaatatagaaggtaagcagcactttactcaacctcctgccaaattt
tcggaggcatctttagttaaaactttagaagaaaatggaataggtagaccaagcacttat
gcacctatcatatctacacttttagaaagaaagtatatagaaagaaataaaaaggttctt
gatcctacagagcttggttacattgttaataatttaatgagtgagtattttaaagaaata
gtagatgttgaatttacagctgccatggagaataagttagacagcgtagaagaaggtaaa
gaatcctggaaaaaaatagtagatgacttttttataccagtcaaaaaatctatagatata
gctgaaaaggaaattgctaaaattactattgaagatgaagttactgatattgaatgtgac
aaatgcggaagaaaaatggtcataaagcatggaagatttggagattttcttgcttgtcct
ggatatcctgagtgtaaaaacactaaaccattagcggcagaattagatgtaccttgcccg
aagtgtggaagtaaaatattagagaaaagaagtagaaaaggaaataaattttatggatgc
agctcttatccagaatgtgactttgtaagttggtttgagcctacaagtgaaagatgtcca
caatgcaatgaaataatggtcaaaagatatacaaaaacaaaaggcgattatttagaatgt
ataaataaagattgtaagtataaaaaagagcaaaatatgcaaaataatagtacagaagat
taa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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