KEGG   Chryseobacterium arthrosphaerae: EGY05_20650
Entry
EGY05_20650       CDS       T05746                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
carh  Chryseobacterium arthrosphaerae
Brite
KEGG Orthology (KO) [BR:carh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:carh03016]
    EGY05_20650
Enzymes [BR:carh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     EGY05_20650
Transfer RNA biogenesis [BR:carh03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    EGY05_20650
 Prokaryotic type
   tRNA splicing ligases
    EGY05_20650
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: AYZ14202
Position
complement(4519235..4520626)
AA seq 463 aa
MGNLKLKGKDILKLGYPNNQSVNVALEVMKRNFATKNIHHVKSLLKEILLNPEDFEKDLT
FGQIAETLLSSKKTEKRMLNSQRTSFQIFGSNISEEAKNQLYTALKLPISTQGALMPDAH
SGYGLPIGGVLAVENAVLPYGVGMDIGCRMSLSILDTPVSYLDGARDKYEKALAEHTKFG
MYETHKSHIDHEIFDRDTFDLIPVLRRLKGKAIKQMGSSGGGNHFVEFGEVEITEEDEQI
GLPKGKYLGILSHSGSRGLGAEIAQYYSRVAAEQCPLPKEAQSFAWLDLSTHLGLEYWTA
MNLAGDYASACHDDIHRRLVKAVGGRVKARIENHHNFAWKEIHNGKEVIVHRKGATPANE
NELGMIPGSMTAKGFIVRGKGNPDALNSASHGAGRAHSRGECRSLFTQHDIKKELKLKNV
TLMGGNAEEAPMAYKDINEVMNAQSELVDILGTFQPRIVRMDK
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgggaaatttaaaactaaaaggaaaagatatattaaaactgggctatcccaataaccaa
agcgtaaacgtagcactggaagtcatgaaaagaaattttgcaaccaagaatattcatcac
gtaaaatctcttttaaaggaaattctgctgaatccggaagattttgaaaaagatctcacc
ttcgggcaaattgcagaaaccctgctttcatccaaaaaaacagaaaagagaatgctgaat
tcacagcgtacttcatttcagatttttggaagcaatatttcagaagaagcaaaaaaccag
ctgtacaccgctttgaaattgccaatttccacacagggagcattaatgcctgatgcccat
agcggctacggacttccgatcggaggagtgctcgctgtagaaaatgcggtacttccttac
ggcgtgggaatggatatcggatgcagaatgagcctcagtattttggatacaccagtttca
tatcttgacggtgcaagagataaatatgaaaaagcgcttgcagaacatacaaaattcggg
atgtacgagacccataaatctcatattgatcacgaaatcttcgatagggataccttcgat
ctgattcctgtcctgagaagattaaaaggaaaagcaatcaaacagatgggatcctccgga
ggaggaaatcattttgtagaattcggggaagtggaaatcaccgaagaagatgagcagatt
ggcttaccgaaaggaaaatacctgggaatactgtcgcacagcggatccagaggactagga
gccgaaatcgcccagtattattcaagagtggctgcagagcagtgtccgctgccaaaagaa
gcacagagctttgcctggctggatctgagcacccatcttggtctggaatactggacggcc
atgaaccttgccggagactatgcctcagcatgtcatgatgatatccacagaagacttgta
aaagctgttggcggaagagtaaaagccagaatagagaaccatcacaactttgcctggaag
gaaattcacaacggaaaagaagtgattgttcacagaaaaggagctactcctgccaatgag
aatgaactgggaatgatcccgggctctatgacagctaaaggattcatcgtccgtggaaaa
ggaaatccggatgctctgaactctgcgtcacatggtgcggggagagcccattcaagagga
gaatgcaggagcctttttacacagcatgacatcaaaaaagagcttaagctgaagaatgtc
accctgatgggcgggaatgcagaagaagcacctatggcgtacaaagacatcaatgaagtg
atgaacgcacaaagcgagctggtagatatcctggggacatttcagccgagaattgtaagg
atggacaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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