KEGG T05901: CSW63

Caulobacter sp. FWC26: CSW63_06995

Entry

CSW63_06995       CDS       T05901

Name

(GenBank) sigma-70 family RNA polymerase sigma factor

K03088

RNA polymerase sigma-70 factor, ECF subfamily

Organism

cauf Caulobacter sp. FWC26

Brite

KEGG Orthology (KO) [BR:cauf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cauf03021]
    CSW63_06995
Transcription machinery [BR:cauf03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CSW63_06995

SSDB

Motif

Pfam:

Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF Xre-like-HTH HTH_AsnC-type DUF746 HTH_28 HTH_24 Phage-tail_3 HTH_23 DUF134 DUF3686

Other DBs

NCBI-ProteinID:

AZS20418

UniProt:

A0A3Q9IJ27

Position

complement(1157054..1157623)

AA seq 189 aa
MDQQTQKLFERDLVALIPHLRAFARSLCGNPAMADDLAQEAVAKAWASRKSFTMGTNMKA
WTFMILRNQFYSDKRRSWRSVALDQEMAERTLVANTNFDGAIALDDLRQAMLMLPENQRE
ALILIGAGGFSYEEAAEMIGVAVGTVKSRVSRARAELVNLFESGDYVRDGKPAGEAMASM
LRTLELLAA

NT seq 570 nt +upstreamnt +downstreamnt
atggaccagcagacccagaagctttttgagcgtgacctggtcgctctgatcccgcacctg
cgcgctttcgcccgctcgctgtgcggcaatcccgcgatggccgacgatctggcgcaggag
gcggtggccaaagcctgggccagccgcaagagcttcaccatgggcacaaacatgaaggcc
tggaccttcatgatcctgcgcaaccagttctattccgacaagcgccgcagctggcgctcg
gtggcgctggaccaggaaatggccgagcgcaccctggtggccaacaccaatttcgacggc
gcgatcgccctggacgacctgcgccaggcgatgctgatgctgcccgagaaccagcgcgag
gcgctgatcctgatcggcgccggcggcttctcttacgaagaggcggccgagatgatcggc
gtcgccgtcggcacggtgaagagccgcgtcagccgcgcccgcgcagagctggtcaacctg
ttcgagagcggcgactatgtccgcgacggcaagcccgccggcgaagccatggcctcgatg
ctgcgcacgctggaactgctggcggcttag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (19)   

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