KEGG   Chlamydia avium: M832_07730
Entry
M832_07730        CDS       T03069                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cav  Chlamydia avium
Pathway
cav02020  Two-component system
cav02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M832_07730 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M832_07730 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cav03021]
    M832_07730 (rpoN)
Transcription machinery [BR:cav03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M832_07730 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AHK63622
UniProt: W8K185
Position
842029..843309
AA seq 426 aa
MFRPEQKLSLKYLPSLRMQQGLHMLQFPITELSSYLLQQIIHNPCFDLSSLEEEEWSPCL
SLPSIEVSQPESLLSYLYTQIQHTFDNPQDVRIAQHIIGNLSEQGLLSIPIQELALQLEV
PVEEIAQIQIKIQHFHPLGIASSSLQDYWLFLLKHSSHTLAYTLIKDHYNALRNCDFSSI
AKKLRCSPNHLLKSLKDALTSIPWSPAAGYTSPRSCPQPSLPDIYLKYEVGIWEIHINSR
GLPPIRIDSHVLHIYEQLPEQEKKNLKHQILSAKWLIKNLKKREQLLFAIVEKMLPYQES
FLLGKSSAPQALSVKFLAEELPYHQSTLFRAIENKTIATPKGIFPLKYLFPRPIHNSTQS
KETILRWIHQWISSETSPLSDADISKRISEQGIPCARRTVAKYRAQLNILPAHKRHRYVK
RFYSKT
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgtttcgtccagaacaaaaactttctttaaaatacctaccctcgctacgtatgcaacaa
gggttgcatatgttgcaattccctattacggagctatcttcttacttgttgcaacaaatt
attcataacccttgttttgatctttcctctttagaggaagaggaatggtctccttgtttg
tctctaccttccatagaagtatcgcaacctgaatctcttctatcctatctttatactcaa
atacaacatactttcgataatccacaagacgttcggatagctcaacacattataggaaat
ctatctgagcaaggtttattgtccatccctattcaagaactggcattacaactagaagtg
ccagtagaagagattgcccaaatacaaatcaaaatccagcattttcatcctctaggcata
gcttcgtcatccctacaagattactggttattccttttgaaacattcctctcatacacta
gcctatactcttatcaaggaccactacaatgcattaaggaattgtgatttctcctctata
gctaaaaaacttcgctgttctcccaatcatcttcttaaatccttaaaagatgcattaaca
tctatcccttggtctcctgctgcaggttatacctcgcctcgatcttgtcctcagccttct
cttcctgatatttatcttaaatatgaagttggcatttgggagattcacattaactctcga
ggtctgccaccaattagaattgactcccatgttttacatatttacgaacaactaccggaa
caagaaaaaaagaatctaaaacaccaaattctttctgcaaaatggttgatcaaaaattta
aaaaaacgagaacaattattatttgctattgttgagaaaatgcttccttatcaagagagt
tttcttcttgggaagtcttctgctcctcaagctctttctgtaaaattcctagcggaagag
ctaccttatcaccaatctactttattccgtgctatagaaaacaaaactattgctacaccc
aaaggaatcttccctttaaagtatttatttcctcgacctattcataatagcacacaatct
aaagaaacaattttacgctggattcatcagtggatctcatcggaaacttctcctctatct
gatgccgatattagcaaaagaatctcagaacaaggtattccttgtgcccgacgtacagta
gctaaataccgcgctcaattgaatatcctgcctgcgcacaaacgccatagatatgtaaag
cggttttacagcaaaacttaa

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