KEGG T03227: CATYP

Corynebacterium atypicum: CATYP_09075

Entry

CATYP_09075       CDS       T03227

Name

(GenBank) lysyl-tRNA synthetase

K04567

lysyl-tRNA synthetase, class II [EC:6.1.1.6]

Organism

cax Corynebacterium atypicum

Pathway

cax00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:cax00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CATYP_09075
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cax01007]
    CATYP_09075
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cax03016]
    CATYP_09075
Enzymes [BR:cax01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CATYP_09075
Amino acid related enzymes [BR:cax01007]
Aminoacyl-tRNA synthetase
  Class II (A)
   CATYP_09075
Transfer RNA biogenesis [BR:cax03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CATYP_09075
Prokaryotic type
   Other AARSs
    CATYP_09075

SSDB

Motif

Pfam:

tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d

Other DBs

NCBI-ProteinID:

AIG64686

Position

complement(1991903..1993504)

AA seq 533 aa
MTDNVAPESTNSAARRRGPELSEQERVRRDKRERILSTGQEAYPVQVDRTCSIREVRQRF
RALGQDEQPAGQDGVTELKPGEETDTEVSLAGRLMFMRNTGKLCFASLQEGDGTQIQAML
SLAEVGKEALDAWKADVDLGDIVSVTGRVVASRRGELSVMVSRWQLASKALRPLPVSFAE
LAEDTRVRHRYTDLIMRSAARENALTRIKVMRALRRYLEDHGFLEVETPMLQTLHGGAAA
RPFITHSNALDIDLYLRIAPELYLKRCVVGGLERVFEVNRNFRNEGVDSSHSPEFAMLET
YQAWGTYETGARLIKGLVQYVAQELFGTTRVMLADGAEYDFGGEWKVLEMYPSLNEALAR
KFPGQPEVTVDSSVAELRGIADAIGLDWPKDGGWGHGKLVEEIWEHLCSDQLYEPTFVKD
FPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDE
EAMVLDEDFLEAMEQGMPPTSGNGMGIDRLLMALTGLGIRETVLFPLVKPEQA

NT seq 1602 nt +upstreamnt +downstreamnt
gtgactgacaacgtagcaccggaatcgacgaactcggccgcgcgccgccgcggccccgaa
ttgagcgagcaggagcgggttcgccgcgataagcgggagcgtattttatccactggccag
gaggcctacccggtacaggtggaccgcacctgctcaatccgggaggtccggcagcgcttt
cgggcgttggggcaggatgagcagccggcgggccaggacggtgttaccgagctcaagcct
ggcgaggagaccgatacggaggtttcgttggccggccgcctgatgtttatgcgcaacacg
ggcaagctgtgcttcgccagcctgcaggagggcgatggcactcagatccaggcgatgctc
tcgttggccgaggtgggcaaggaggcgttggacgcctggaaggcggacgtcgatttgggc
gacatcgtctcggttactggccgggtggtggcgtcgcgtcgcggcgagctttcggtgatg
gtttcgcggtggcagttggcgtccaaggccctgcgcccgttgccggtttcgttcgcggaa
ctggctgaggatacccgggtgcgccaccgctacactgacttgattatgcggtcggccgcc
cgagagaacgcgttgaccaggatcaaggtgatgcgtgcgctgcgccggtacttggaggat
cacggcttccttgaggtggagacgccgatgttgcagacgctgcacgggggtgcggcggcg
cggccgttcatcacgcattcgaacgcgttggatattgatttgtatctgcggatcgccccg
gagctttatttgaagcgctgcgtggttggcggcttggagcgggtctttgaggtgaaccgg
aacttccgtaatgagggcgtcgattcttcgcatagcccggagtttgcgatgctggagacg
taccaggcgtggggcacctacgagacgggcgcgcggctgatcaaggggctggtgcagtac
gtggcgcaggagcttttcggtacaacgagggtgatgcttgccgacggcgcggagtatgac
tttggcggcgagtggaaggtacttgagatgtacccttcgctgaatgaggcgttggcgcgc
aagttcccgggtcagcctgaggtgacggttgattccagcgtggcggagctgcgtgggatc
gctgacgcgattggtctggattggccgaaggacggcggctggggccacgggaagttggtc
gaggagatctgggagcacttgtgctcggatcagttgtacgagccgacgtttgtcaaggac
ttcccggttgagacgtctccgttgactcgccagcaccggtcgaagccgggggtgacggag
aagtgggatctgtacgtgcgcggctttgagctggctaccggctactcggagctggtggac
ccggtgattcagcgtgagcgtttcgaggatcaggcccggcttgccgctggcggcgatgaa
gaggcgatggtgctcgacgaggacttcctcgaggcgatggagcagggcatgccgccgacg
tctggtaacggcatggggatcgatcggttgctgatggctttgactggcctggggatccgg
gagacggtgcttttcccgctggtcaagccggagcaggcgtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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