KEGG   Caloranaerobacter azorensis: G3A45_03945
Entry
G3A45_03945       CDS       T06467                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cazo  Caloranaerobacter azorensis
Pathway
cazo03410  Base excision repair
cazo03430  Mismatch repair
cazo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cazo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    G3A45_03945 (recJ)
   03430 Mismatch repair
    G3A45_03945 (recJ)
   03440 Homologous recombination
    G3A45_03945 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cazo03400]
    G3A45_03945 (recJ)
DNA repair and recombination proteins [BR:cazo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     G3A45_03945 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     G3A45_03945 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      G3A45_03945 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 tRNA_anti-codon tRNA_anti_2 HTH_28
Other DBs
NCBI-ProteinID: QIB26534
UniProt: A0A6P1YBR1
Position
complement(720340..722880)
AA seq 846 aa
MIRYDKFIKLYNEDYSNVNEISSAFGISSITAKVLINRGIKTVEECKNFINVSLENLYNP
FLLKDMDVAVERIINAIQKNEQIWIYGDYDVDGITSTTILKLYLQKIGCNVNYYIPDRMT
EGYGVNKDAIDYIVDKGGQLIITVDCGITAIDEVKYCNEKGIEIIITDHHLCKEEIPNAL
AVINPNRKDSDYPFKKLAGVGVAFKLIQAISNKLNIEIPIREILPIVAIGTVADVVSLTG
ENRILVKEGLALINQTENIGVKALLEVTGLKDKDITVGHVGFVIGPRINAAGRLGSAKTG
VELLTCKSKEKALSLAVELDRINRERQEIEMQILKEAEEIIKNDSRYEKEKVLVIAKENW
HHGVIGIVASRICEKYFKPCILIAIEGNQGRGSARSIPTFDIYEGLSRVSEFFNKFGGHK
QAAGLSINTEKIEDFRKGINEIAEELLMEEDMIDEIKVDDVLKIKDIDYKIIDELKLLKP
YGIGNPSPLFISKDVKLINIKAVGSEGKHLKFSIEDEENVVDCIGFNLGYKMQYIKEGDR
VDIVFLPDVNIYMNETKIQLNIKDIFIRNKISNDIEEKYYLDFIYNLKEKRNNTISNPDN
KIIIKKVDDRIRYLIGFLHNNDNTLVIINNLLNAKRVINELYFQGREFNKRISINIGDEF
KIRTNTLLISPLYRGYDLSVFDKIIFFDICFDEIDFFDIIKKLIYKEVYLLFDEEDFKMN
QVLLNDFIPKLIELRIIYKTFLLNKKNVFKIDIESYFNYLNKNFKIKINRSKFIFILEVL
KDSNLIEYKIVQNDYYIKLKQKPKDNIEILEIPVYKSANFLLDNQKRMKNTFLNLFELKK
EEMLWI
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgataagatatgacaagtttataaaattatacaatgaagattacagtaatgtaaatgaa
attagcagtgcttttggcatatctagtataactgcgaaagttctcataaatagagggatt
aaaactgtagaagaatgtaaaaattttattaatgtaagtttagaaaatctatacaatcct
tttttgcttaaagatatggatgtagctgttgaaagaataattaatgcgattcaaaaaaat
gagcagatatggatttatggagattatgatgtggatggaattaccagcacaacgatttta
aagttgtatttacaaaagataggctgcaatgttaactattatatacctgataggatgaca
gagggatacggtgttaataaggatgctatcgattatatagtagataaaggtggacaactt
attattactgtcgattgcggtattacagctattgatgaagtcaaatattgtaatgaaaaa
ggtattgagattataattacagatcatcacttgtgcaaagaagaaatacctaatgctctg
gcagtgataaatcctaatagaaaagatagcgattacccttttaaaaaattagctggagta
ggggttgcatttaaattgattcaagccatatctaacaaattaaatattgaaatccctata
agagaaatattacctattgttgcgatagggacagtagcagatgttgtttcgctaacaggc
gaaaataggattttagtaaaagaaggtttagcattaattaatcaaactgaaaatatagga
gttaaggctttattagaagtaactggattaaaagataaagatataacggttggacatgta
ggatttgtaataggcccaagaattaatgcagctggaagattaggttctgctaaaactggt
gttgagcttttaacgtgcaaatcaaaagaaaaggctttatcactagctgtagaattagat
agaataaatagagaacgtcaggaaatcgagatgcaaatattaaaagaagcagaagaaatt
attaaaaatgatagcagatatgaaaaagaaaaagtgcttgtaattgcaaaagaaaattgg
catcatggtgtaattgggattgtagcatcacgaatatgcgaaaaatactttaaaccatgt
attttaatagcgattgaaggtaatcaaggtagagggtcagctaggagtataccgactttt
gatatatatgagggattaagtagagtaagtgagttttttaataaatttggcggacataaa
caggctgcagggttgtcaattaatacagaaaaaattgaagactttaggaaaggaataaat
gagattgccgaagaattacttatggaagaagatatgattgatgagataaaagttgatgat
gtactaaagattaaagatatagattataaaattatagatgaattaaaattattaaaacca
tatggtattggtaatccttctccgttatttattagtaaagatgtgaaacttatcaatatt
aaagcggttggttctgaaggaaaacacttaaagtttagtattgaagatgaagaaaatgtt
gtggattgtataggttttaatttgggttataagatgcaatatattaaagaaggcgataga
gtagatattgtatttttacctgatgtaaacatatatatgaatgaaacaaagattcaatta
aatataaaggatatatttattaggaataagattagcaatgatattgaggaaaaatattat
ttagactttatttataacttaaaagaaaaaaggaataatactatttctaatccagataat
aaaataatcattaaaaaagttgatgataggataagatatttaattggatttctgcataat
aatgataatactttggtcataataaataatttattaaatgcaaagagagtaattaatgag
ttatattttcaagggagagagtttaataaaagaatatctattaatattggggatgaattt
aaaattaggacaaatacgttactaataagtccgctatatagaggatatgacttaagtgta
tttgataaaataattttttttgatatttgttttgatgaaatcgatttttttgatataata
aaaaagctaatatataaagaagtatatcttttattcgatgaagaagattttaaaatgaac
caagttcttttaaatgactttattcctaaattaatagaattgagaattatttacaaaaca
tttcttttaaataaaaagaatgtatttaaaattgatattgaaagttattttaattattta
aataaaaattttaaaattaaaattaatagaagtaaatttatttttatacttgaagtatta
aaagatagtaatttgattgaatataaaattgttcaaaatgattattatataaaattaaaa
cagaaaccgaaagataacatcgaaatattagaaatacctgtatataagagtgcaaatttt
ctattagataatcaaaaaagaatgaagaatacatttctaaatttatttgaattaaagaag
gaggaaatgctatggatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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