KEGG   Serpentinimonas raichei: SRAA_0002
Entry
SRAA_0002         CDS       T03614                                 
Name
(GenBank) DNA polymerase sliding clamp subunit, PCNA homolog
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
cbaa  Serpentinimonas raichei
Pathway
cbaa03030  DNA replication
cbaa03430  Mismatch repair
cbaa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SRAA_0002
   03430 Mismatch repair
    SRAA_0002
   03440 Homologous recombination
    SRAA_0002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbaa03032]
    SRAA_0002
   03400 DNA repair and recombination proteins [BR:cbaa03400]
    SRAA_0002
Enzymes [BR:cbaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SRAA_0002
DNA replication proteins [BR:cbaa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SRAA_0002
DNA repair and recombination proteins [BR:cbaa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SRAA_0002
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: BAO79856
UniProt: A0A060NF26
Position
1597..2703
AA seq 368 aa
MIVVQSTQDKLLAALQAVSGIVERRHTMPVLANVLLRKVGGLVELTTSDLEIQIRTQAEL
GGDEGAFATTVGARKLIDILRTLPAEQKVTLEAQQSKLILKGGKSRFTLQTLPAEDFPLV
QQAPSFGPTFSVPQKVFKSLLGQVSFAMAVQDIRFYLNGILFVAEGKTLSLVATDGHRLA
FSSAALEVEVPKQEVILPRKTVLELQRLLSQAEGEVELQFASNQARFSFGGLEFISKLVE
GKFPDYHRVIPRQHPHVLLLGRQPLLAALQRAALMTSDKFKGVRLSLEPGVLRLVAHNAE
QEEALDELDIEYQGPMIEMGFNVTYLIEGLSNMGQEMVRLELADNNASALLTIPEHESYK
YVVMPMRI
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgatcgttgtgcaatcgacccaagacaagctgttggccgccctgcaggcggtgtcgggc
attgtggagcgccgccacaccatgccggtgctggccaatgtgctgctgcgcaaagtcggg
ggcttggtggagctgaccaccagcgacctcgaaatccagattcgcacccaggccgagctt
gggggcgacgagggcgcctttgccaccacggtgggcgcgcgcaagctgatcgacattttg
cgcaccctgccggccgaacaaaaagtcacgctggaggcgcagcagtccaaactcatccta
aagggcggcaaatcacgcttcacgctgcaaaccctgcccgccgaagattttccgctggtg
cagcaggcccccagcttcggcccaaccttcagcgtgccgcaaaaggtgttcaagagcttg
ctgggccaagtctcctttgccatggcggtgcaagacatccgcttctacttgaatggcatt
ttgttcgtcgccgaaggcaagaccctgagtctggtggccaccgacgggcaccggttggcc
ttctccagcgccgcgctcgaggtcgaggtgcccaaacaagaggtgatcctcccacgcaag
acggtgctggagttgcagcggctgctgtcgcaggccgagggcgaagtcgaactgcaattt
gcctccaaccaagcccgcttcagctttggcggcctagagttcatcagcaagctggtggag
ggcaagttcccggactaccaccgcgtcatcccgcgccagcacccgcacgtgctgttgctg
ggtcgccagccgctgctggccgcgctgcaacgcgccgccctcatgaccagcgacaagttc
aagggtgtgcgcctaagcctggagcccggtgtgttgcggctggtggcgcacaacgccgag
caggaagaggcgctggacgagctcgacatcgagtaccaggggcccatgatcgagatgggc
ttcaacgtcacctacctgatcgagggcttgagcaacatgggccaggagatggtgcgcttg
gagctggccgataacaacgcctcggcgctgttgaccattcccgaacacgagagctacaaa
tacgtggtgatgccgatgcgcatctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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