KEGG   Serpentinimonas raichei: SRAA_1431
Entry
SRAA_1431         CDS       T03614                                 
Symbol
gyrA
Name
(GenBank) type IIA topoisomerase, A subunit
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
cbaa  Serpentinimonas raichei
Brite
KEGG Orthology (KO) [BR:cbaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbaa03032]
    SRAA_1431 (gyrA)
   03400 DNA repair and recombination proteins [BR:cbaa03400]
    SRAA_1431 (gyrA)
Enzymes [BR:cbaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SRAA_1431 (gyrA)
DNA replication proteins [BR:cbaa03032]
 Prokaryotic type
  DNA Topoisomerases
   SRAA_1431 (gyrA)
DNA repair and recombination proteins [BR:cbaa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SRAA_1431 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: BAO81285
UniProt: A0A060NJG9
Position
complement(1541842..1544592)
AA seq 916 aa
MTAFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELGNDWN
RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHLLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHEMLADIDQDTVNFGPNYDGSEKEPLVLPARWPNLLVNGSTGIAVGMAT
NIPPHNLSEVVDACLHLLRHPQASVDDLMEIIPAPDFPTAGIIYGIHGVREGYRTGRGRL
VMRAKCHFEDIDRGQRQAIVVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLIDIFLQHRRE
VVTRRTVFKLRKARERGHVLEGLAVALANIDEFIRIIRESATPVQARTELMARHWDSQLV
RQMLTRTRADGSSVNADDYRPDALEREFGMQPEGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYRAVMAEIDDLLDILATPQRVSQIIADELTAIKTEFGLTRLGARRSTIEHSAHDL
STEDLITPTDMVVTLSHGGYIKSQPLGEYRAQKRGGRGKLATATKEDDWIDQLFIANTHD
WILCFSNRGRLYWLKVWEVPSGSRGSRGRPIVNMFPLAEGEKINVALALTGSNRRFPADQ
YVFMATAMGTVKKTALDEFSNPRKAGIIAVDLDEGDFLIGAALTDGHHDVMLFSDGGKAV
RFDENDVRPMGRNARGVRGMMLEEGQRVIAMLVAEASEATESDTASDTPTGSASAAPRAS
VLCATENGYGKRTAISEYTRHGRGTKGMIAIQQTERNGKVVAATLVHPEDEIMLITDSGV
LVRTRVAEIREMGRATQGVTLIATDAGAKLSGLQRVVENDAAIATGAGAGVGEESEPATD
EPGPAPAPAADDAAAE
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgactgctttcgccaaggaaaccctgcccatcagcctcgaagaggagatgcggcgcagc
tacctcgactacgccatgagcgtgatcgtgggccgggccttgcccgatgcgcgcgatggc
ctcaagccggtgcaccggcgcgtgctgtttgccatgcacgaactgggcaacgactggaac
cggccctacaaaaaatcggcgcgcatcgtcggtgacgtgatcggtaagtaccacccgcac
ggcgacagcgcggtctatgacacgatcgtgcgcatggcgcaggatttttcgctgcgccac
ctgcttgtcgatgggcagggcaacttcggctcggtcgatggcgacaacgccgccgccatg
cgctacaccgaaatccggctctccaagatcgcgcacgagatgctggccgacatcgaccaa
gacacggtgaactttggccccaactacgacggcagcgaaaaagagccactggtgctgccg
gcgcgctggcccaatttgctggtcaatggctcgaccggcattgcggtcggtatggcgacc
aacattccgccgcacaacttaagcgaagtggtcgatgcctgcctgcacctgctgcgccac
ccgcaagccagcgtggatgacttgatggaaatcatcccggcgcccgacttccccaccgcc
ggcatcatctacggcatccacggcgtgcgcgagggctaccgcactggccgtgggcggctg
gtgatgcgcgccaaatgccatttcgaagacatagaccgcggccagcgccaggccatcgtg
gtcgatgagctgccgtatcaggtcaacaaaaagacgctgcaagagcgcatggccgagctg
gtgcacgagaaaaaaatcgagggcatcagccacatccaggacgaatccgacaaatccggc
atgcggctggtgatcgagctcaagcgcggcgaagtgcccgaggtggtgctcaacaacctg
tacaagcaaacgcagctccaagacacctttggcatcaacatggtggcccttgtcgatggc
cagcccaagttgtgcaacctcaaggatttgatcgacattttcctgcagcaccggcgcgag
gtggtgacgcggcgcaccgtgtttaagctgcgcaaggcgcgcgagcgcggccacgtgctg
gaggggctggcggtggcgctggccaatatcgacgagttcatccgcatcatccgcgaatcg
gccacgccggtgcaggcgcgcaccgagctcatggcgcggcactgggacagccaactggtg
cgccagatgctcacccgcacccgcgccgacggcagcagcgtgaatgccgacgactaccgc
ccggacgcgctggagcgcgagttcggcatgcagcccgagggcctgtaccgcctgagcgag
acacaggcgcaagaaattttgcagatgcggctgcagcgcctgaccgggctggagcaagac
aaaatcgtggccgaataccgcgctgtgatggccgaaatcgacgatttgctcgacatcctg
gccacgccgcagcgggtttcgcagatcatcgccgacgaactcacggccatcaaaaccgag
tttggcctcacgcggctgggcgcgcggcgcagcaccatcgagcacagcgcgcacgacctt
tcaaccgaagacctgatcaccccgaccgatatggtggtcacgctcagccacggcggctac
atcaagagccagccgctgggcgagtaccgggcacaaaagcgcggcgggcgcggcaagctg
gccactgccaccaaagaggacgactggatcgaccaactcttcatcgccaacacgcacgac
tggattttgtgcttttccaaccgcggccgcctgtactggctcaaggtctgggaggtgcca
tcgggttcgcgcggctcgcgtgggcgcccgatcgtgaacatgttcccgctcgccgaaggc
gaaaaaatcaatgtggcgctggcgctcaccgggtccaaccggcgcttcccggcggaccag
tatgtgttcatggccaccgccatgggcacggtgaaaaagaccgcgctcgatgagttctcc
aacccgcgcaaggccggcatcattgccgtcgatctggacgagggcgacttcctgatcggg
gccgcgctcaccgacggccaccacgacgtgatgctgttctccgacggcggcaaggcggtg
cgtttcgatgaaaacgatgtgcgcccgatgggccgcaacgcgcgcggcgtgcgcggcatg
atgctcgaagaaggccagcgcgtgatcgccatgctggtggccgaggcctccgaggccacc
gaatccgacaccgcatccgacaccccaacgggcagcgccagcgccgcaccccgcgccagc
gtgctgtgcgcgaccgaaaacggctatggcaagcgcaccgccatcagcgaatacacgcgc
cacggccgcggcaccaagggcatgatcgccatccagcaaaccgagcgcaacggcaaggtg
gtggccgccaccttggtgcacccggaggacgaaatcatgctgattaccgacagcggcgtg
ctggtgcgcacccgggtggccgaaatccgcgagatgggccgcgccacccagggcgtgacc
ctgatcgccaccgatgccggcgccaagctcagcggcttgcagcgcgtggtggaaaacgat
gccgccattgcgaccggggcgggggctggggtgggtgaggaatcggagcctgcaactgac
gaacccggcccagcccccgccccggccgccgacgacgctgcggccgaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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