KEGG   Berryella intestinalis: JI75_03635
Entry
JI75_03635        CDS       T03545                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
cbac  Berryella intestinalis
Brite
KEGG Orthology (KO) [BR:cbac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbac03016]
    JI75_03635
Enzymes [BR:cbac01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     JI75_03635
Transfer RNA biogenesis [BR:cbac03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    JI75_03635
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AJC11893
UniProt: A0A0A8B4Z0
Position
791818..792960
AA seq 380 aa
MYIESQDELVSFVQRAANSSLLAIDTEFLREKTYYAKLCLLQIATDDEVVIIDPLAVSDI
TALAPLLVDERIVKIFHAGHQDLELLYRNVGVLPSPVFDTQIAAALLGHTQQIGYGSLVG
ALCGVRIKKADSFTDWSHRPLSDSQIQYAGEDVVYLPKIYATMKRRLEEKGRLEWLRNDF
AELSDPSRYEVDERERFRRLKHVSSLSRCQMAAAREMAAWREAAARERNIPRKWVLSDEQ
IVEACKREPRTIDDLFMVRGMRERLNVRDARTIISRVASAMNAPASTWPDSGNPSKSEPN
VDMQVDLMMAIVRMRARENDIAIPTLASHDDLTKIARGYCDDVEILRGWRRELIGAELLD
LLNGRIALSVENGSVRVDRF
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgtacatagaaagccaagacgagcttgtctccttcgtccaacgggctgcgaattcctcg
cttctggcgatcgacaccgagttcctccgcgagaaaacctactacgcgaagctctgtctg
ctgcagatcgccaccgatgacgaagtggtcatcatcgatcctttggccgtatccgacatc
accgcgctcgcgccgcttctggtcgacgagcgcatcgtcaagatctttcacgcgggtcac
caggatctcgagcttctgtaccgcaacgtgggcgttttgccctcgcctgtgttcgacacg
cagatcgccgcagcgcttttagggcacacccagcagatcggatacgggtcgctggtgggg
gccctgtgcggggtgcggatcaagaaagcggactcgttcaccgactggtcgcaccgcccc
ctgtccgactcccagatccagtacgcgggagaggacgtggtctaccttcccaagatctac
gcgacgatgaagcgccgtctggaggagaagggccgtctggagtggctgcgcaacgatttc
gccgagctgtccgacccgtcgcgctacgaggttgacgagcgcgaacggttccgccggctg
aagcacgtctcgtccctgtcgcgctgccagatggccgctgcgcgcgagatggccgcctgg
cgggaagccgccgcgcgcgaacgcaacataccccgcaagtgggtcctgtcagacgagcag
atcgtcgaggcctgcaaacgcgagccgcgcaccatcgacgatctgttcatggtccgcggc
atgcgcgagcggctgaacgtgcgcgacgcccgcacgatcatctcgcgggtcgcatcggcg
atgaacgcgccggccagcacctggcccgactcggggaatccgtcgaaaagcgagcccaac
gtcgacatgcaggtcgatctcatgatggccatcgtgcgcatgcgggcgcgcgagaacgac
atcgccatcccgacgcttgccagccacgacgacctgaccaagatcgcccgcgggtactgc
gacgacgtcgagatcctgcgcgggtggcgccgcgagctgatcggggcggagctgctcgat
cttctgaacgggaggatcgcgctttcggtggagaacggctcggtgcgcgtcgatcggttc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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