KEGG   Berryella intestinalis: JI75_03925
Entry
JI75_03925        CDS       T03545                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
cbac  Berryella intestinalis
Pathway
cbac03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cbac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    JI75_03925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbac03021]
    JI75_03925
   03400 DNA repair and recombination proteins [BR:cbac03400]
    JI75_03925
Enzymes [BR:cbac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     JI75_03925
Transcription machinery [BR:cbac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     JI75_03925
DNA repair and recombination proteins [BR:cbac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      JI75_03925
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF1308
Other DBs
NCBI-ProteinID: AJC11941
UniProt: A0A0A8B378
Position
856912..857172
AA seq 86 aa
MSIIEPKVDVLLDHTDNDRFLLCAMASKRAHDINDMMHGQRERAIQLQTAVEIARAADTK
PLSIAFGEIAQGDVSYDPASIDAMNH
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagcattatcgaacccaaggtcgacgtacttctggatcacaccgacaacgaccgtttc
ctgctgtgcgcgatggcttccaagcgcgcccacgacatcaacgacatgatgcacggtcag
cgcgagcgcgccatccagctgcagaccgcggtcgagatcgcgcgcgctgccgacaccaag
ccgttgagcatcgcattcggcgagatcgcgcagggagacgtctcctacgatcccgcttcg
atcgacgcgatgaaccactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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