KEGG   Cellulophaga baltica NN016038: M667_08585
Entry
M667_08585        CDS       T03562                                 
Name
(GenBank) polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cbal  Cellulophaga baltica NN016038
Pathway
cbal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M667_08585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbal03019]
    M667_08585
   03016 Transfer RNA biogenesis [BR:cbal03016]
    M667_08585
Enzymes [BR:cbal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     M667_08585
Messenger RNA biogenesis [BR:cbal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     M667_08585
Transfer RNA biogenesis [BR:cbal03016]
 Prokaryotic type
  tRNA degradation factors
   M667_08585
SSDB
Motif
Pfam: RNase_PH RNase_PH_C KH_1 PNPase S1 S1_2
Other DBs
NCBI-ProteinID: AIY13262
Position
complement(1988947..1991181)
AA seq 744 aa
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGNCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDDDVMPEAMAGLAASAAIQLSDFPFECAISEARVGRINGEFVINPTRAQLEESDLEMMI
GASADSVMMVEGEMDEISEEEMADAIKFAHEAIKVQIAAQLRLAEAFGKKEVREYTTAEV
NEDLQKRIHDLAYDKCYAIAKKGTSKAERTAAFAEVKEEVKASFTEEEMEEFGHLVSGYY
SKAEKEAVRELTLSEGLRLDGRKTDEIRPIWCEVDYLPSTHGSSIFTRGETQALATVTLG
TSRDANKIDMPSYEGEENFYLHYNFPPFCTGEARPLRGTSRREVGHGNLAQRGLKGMIPA
DCPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVKMKRPVSGIAMGLISDGDRYAVLS
DILGDEDHLGDMDFKVTGTSEGITACQMDIKIKGLSYEILVNALKQAREGRLHILGKITD
TISAPAEDVKSHAPKMVTRRIPNEFIGALIGPGGKVIQEMQKETGTTIVINEDPVTEEGI
VEILGVGQEGIDAVLAKIDAILFKPELGKSYEVKVIKMLDFGAVVEYAAAPGNEVLLHVS
ELAWERTENVSDVVNMGDVFEVKYFGIDPKTRKEKVSRKALLPKPEGYVARPPRDDKRSG
GRDNRGRDNRGRDDRKPREDKKED
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgattccaaaagtatttagagaggttatagaccttggggacggtagagaaatttctatc
gaaaccggaaaattagcaaaacaggcacatggttctgttgttgttcaatcaggaaactgt
atgttattatgtacagtagtttccaattacaaacaaagcgatgtggactttcttccactt
actgtagattacagagaaaaatttgctgctgcaggtcgttacccaggtggtttctttaaa
agagaagcaagacctagtgatggtgaggtattaaccatgcgtttagtagaccgtgtttta
cgcccattattcccaaaagattatcacgcagaaacacaagttatgattcagttaatgtct
catgatgatgatgttatgcctgaagctatggccggtttagctgcttctgctgctatccaa
ttatcagatttcccatttgaatgcgctatctctgaagcaagagttggtcgtattaatggc
gaattcgtaatcaaccctacaagagcacaattagaagaatctgacttagagatgatgatt
ggtgcttctgcagattctgtaatgatggttgaaggtgagatggatgaaatttctgaagaa
gaaatggctgacgctatcaaatttgctcacgaagctattaaagtacaaattgctgcacag
ttgcgtttagctgaagcttttggtaaaaaagaagttcgtgaatacacaactgccgaagta
aatgaagatttacaaaaaagaatacacgatttagcttacgataaatgttacgctattgct
aaaaaaggaacttctaaagcagaacgtactgctgcatttgcagaagtaaaagaagaggta
aaagcttcttttacagaagaagagatggaagaatttggccatcttgttagcggatactac
agcaaagctgaaaaagaagccgttcgtgaattaacattaagcgaaggcttacgtttagat
ggtcgtaagactgatgaaattagaccaatctggtgtgaagtagattacttaccatctaca
cacggttcttctatttttacgcgtggagaaacacaagcattagcaactgtaactttaggt
acttctagagatgctaacaaaatagatatgccatcttatgaaggcgaagaaaatttctat
ttacattataacttccctcctttttgtacaggtgaagctagaccactaagaggaacttct
agaagagaagttggtcatggtaacttagcgcaacgtggtttaaaaggaatgattcctgca
gattgcccttatacagtccgtgtagtttctgaagtattagaatctaacggttcttcttct
atggcaactgtttgtgctggtacaatggctttaatggatgctggtgttaaaatgaagcgt
cctgtttctggtattgccatgggactaatttctgacggtgaccgttatgctgtattgtct
gatatattaggtgatgaagatcacttaggagatatggactttaaagtaactggtacttct
gaaggaattactgcttgccaaatggatattaaaattaaaggattatcatacgagatttta
gtgaatgcactaaaacaagcacgtgaaggtcgtttacatattttaggtaaaattacagat
actatttctgctccagctgaagatgttaaatctcacgctccaaaaatggtaactagacgt
attcctaacgaattcattggtgctttaattggtcctggtggaaaagttattcaagaaatg
caaaaggaaactggaacaactatcgttatcaacgaagatcctgttacagaagaaggtatt
gttgagatcttaggtgtaggacaagaaggtattgatgctgttttagctaaaatagatgct
atcttatttaagcctgaacttggtaaatcttacgaagtaaaagtaattaaaatgttagat
tttggcgctgttgtagaatatgctgctgctccaggaaacgaggttttattacatgtatct
gaactagcttgggaacgtacagaaaatgtttctgatgttgttaatatgggtgatgttttt
gaagtgaagtactttggtatagatcctaaaactcgtaaagagaaagtatctcgtaaggct
ttattaccaaaacctgaaggttatgttgctagaccaccaagagatgacaaacgttctggt
ggacgtgataacagaggtagagacaatcgtggacgcgatgatagaaaaccaagagaagat
aaaaaagaagattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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