KEGG   Clostridium botulinum B1 Okra: CLD_0566
Entry
CLD_0566          CDS       T00671                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
cbb  Clostridium botulinum B1 Okra
Pathway
cbb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLD_0566 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbb03400]
    CLD_0566 (nth)
Enzymes [BR:cbb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CLD_0566 (nth)
DNA repair and recombination proteins [BR:cbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CLD_0566 (nth)
 Prokaryotic type
     CLD_0566 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH DUF3349 BACK DUF2400 Cyclase HHH_8 IMS_HHH
Other DBs
NCBI-ProteinID: ACA45326
UniProt: B1ID98
Position
250921..251562
AA seq 213 aa
MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEVTKELFKEYST
SKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFGSQVPNDFNDLTSLPGVGRK
TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQLQQAIPKELWILMHHVLI
FHGRRCCVARKPKCEECTIKKYCKYYNEEIKPS
NT seq 642 nt   +upstreamnt  +downstreamnt
ttgaataatcatgaaataaaaaatgttatagatatattagtagacacatatcctgatgct
aattgtgaattagaacacagaaatccttttgaactattaatagctacagtcttgtctgct
caaactacagataaaaaagtaaatgaggtaacaaaggaactatttaaagaatattctact
tctaaggatttcttaaaattaacaagggaagaattagaagagaaaattaaaaaaataggt
ttatatagaaataaatctaagaatatattattgctttgtaaagagttagaagagaagttt
ggaagccaagttcctaacgatttcaatgatctgacttcactaccaggagtaggtagaaaa
accgctaacgtggttttagccaatgcttttaaagtacctactatagcagtagatacccat
gtttttagagtatctaacagaataggattagtagatgctagtaatgtactaaaaacggaa
gagcagttgcagcaagctataccaaaggaactatggatattaatgcatcatgtgttaata
tttcatggaagaagatgttgcgtagctagaaaacctaaatgtgaagaatgtactataaaa
aaatattgcaaatattataatgaagagattaaaccatcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system