KEGG   Clostridium botulinum B1 Okra: CLD_1058
Entry
CLD_1058          CDS       T00671                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
cbb  Clostridium botulinum B1 Okra
Brite
KEGG Orthology (KO) [BR:cbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbb03016]
    CLD_1058 (truA)
Enzymes [BR:cbb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     CLD_1058 (truA)
Transfer RNA biogenesis [BR:cbb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CLD_1058 (truA)
 Prokaryotic type
    CLD_1058 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1 DUF1473 DUF2344
Other DBs
NCBI-ProteinID: ACA45351
UniProt: B1IGC0
Position
complement(3759694..3760434)
AA seq 246 aa
MKNIKLKLEYDGANYCGWQKQKNEKFITLQGTLEKAISNITKEKIEVIGASRTDSGVHAK
GYICNFFTNTKIPPENLQKVINNNLPPDIVVLSSEEASSEFHSRFCSKGKTYEYTVLNSS
QPIAIGRNYIFQFKDKLNIDNMKMASRYFIGTHDFSAFKTKGSSIKTSVRTISKFEINKK
GDFIKFIITGDGFLYNMVRIMVGTLIEIGLNKREPEYIKYVIKSKDRTKAGKCVPSSGLC
LKEVFY
NT seq 741 nt   +upstreamnt  +downstreamnt
gtgaaaaatataaaattgaaacttgagtatgatggagcaaattattgtggatggcaaaaa
caaaaaaatgaaaagtttattacgttacaaggtactttagaaaaagctataagtaatata
actaaagaaaaaatagaagttataggagccagtagaacagattcgggggtccatgctaaa
ggatatatatgcaatttttttacaaacactaaaataccacctgaaaatttacaaaaagta
attaataataatttaccaccagatatagtagttttaagttcagaggaagctagtagtgag
ttccattctagattttgtagtaagggcaagacttatgaatatacagttctaaatagctct
cagcctatagccataggcagaaattatatttttcagtttaaagataaactcaatatagat
aatatgaagatggcatcaagatattttataggaacacatgatttctctgcttttaaaaca
aagggaagtagtataaaaacttcagtaagaactataagtaaatttgaaataaataaaaag
ggtgattttataaagtttataattacaggagatggttttctttataacatggtaagaata
atggtaggtacattgatagaaattggactaaataaaagagaaccagaatatataaagtat
gttataaaatcaaaggatagaacaaaagcagggaaatgtgtgccttcatctggactgtgt
ttaaaggaagtattttattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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