KEGG   Clostridium botulinum B1 Okra: CLD_2435
Entry
CLD_2435          CDS       T00671                                 
Name
(GenBank) C-5 cytosine-specific DNA methylase
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
cbb  Clostridium botulinum B1 Okra
Pathway
cbb00270  Cysteine and methionine metabolism
cbb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cbb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    CLD_2435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cbb03000]
    CLD_2435
   03032 DNA replication proteins [BR:cbb03032]
    CLD_2435
   03036 Chromosome and associated proteins [BR:cbb03036]
    CLD_2435
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cbb02048]
    CLD_2435
Enzymes [BR:cbb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     CLD_2435
Transcription factors [BR:cbb03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    CLD_2435
DNA replication proteins [BR:cbb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    CLD_2435
Chromosome and associated proteins [BR:cbb03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CLD_2435
Prokaryotic defense system [BR:cbb02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    CLD_2435
SSDB
Motif
Pfam: DNA_methylase DNA_pol3_beta_3 DNA_pol3_beta_2 DNA_pol3_beta PCNA_C
Other DBs
NCBI-ProteinID: ACA46803
UniProt: B1IGB6
Position
complement(2334618..2336303)
AA seq 561 aa
MLKVRTLFSGIGSPERALKDLQIPYELVDFCEVDKYAVKSYCSVHGVSEEKNLGDITKVW
GRNLPYADLLVWGFPCPDISVAGKQKGIKEGETRSGLYYEGFRILKETRPKYSIIENVKN
LVGKRFKADFESMLEDIESLGYNNYWKVLNAKDYGIPQNRERVFIVSIRKDIDTGIFSFP
KGFDNGLRLKDFLENEVDEKYYISEKATQGLLRALKRPHTPKMLNKDSEYSPTLDTRVGA
LTHRSPYMCIPCITPDRAEKRQNGRRFKENGDPMFTLTSQDRHGILQVGNIVDTGNWGNP
QRGRIYSPDGISPALNTVGGGGLEPKILKYKRTEYRIRKLTPKECWRLMGFTDEDFQKAK
DEIRPILNGICINKNEFIALDGYRLALRKGNFETKEPVIVAADLIKVINKVKYECNVKIY
YNDNYVKFKFDDLEIVGYRRQGNYINYNSIIPENYNTKVTLKIKPILDILKDYKKNKFKV
VDLDFQNDKLIIKANNDIATVEESITIELQGEPLEISFNADYLIDAFKNYDNATLELTYC
VNPMVIRENNKLDLVLPVRKK
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgttaaaagtaagaacattatttagtggaataggttcacctgaaagagctttaaaagat
ttacaaataccatatgagttagttgatttttgtgaagtagacaaatatgcagtgaaaagt
tactgttcagttcatggagtttcagaggaaaagaatctaggtgatattacaaaagtttgg
ggaagaaaccttccttatgcagatttattagtttgggggttcccatgcccagacattagt
gtagcaggtaaacagaaaggaataaaagaaggagaaactaggagtggattatattacgaa
ggatttaggatattaaaagaaactagacctaaatattcaattatagaaaatgttaaaaac
ttagtaggaaagaggtttaaagctgattttgaaagtatgcttgaggatatagaaagttta
ggatataacaactattggaaagtactcaatgctaaagattatgggatacctcaaaacaga
gaacgagtgtttatagtgagtattagaaaagatattgatactgggatcttcagtttccct
aaaggatttgacaatggattaagacttaaagactttttagagaatgaagttgatgaaaag
tattatataagtgaaaaagccactcaagggctattaagggcattaaaaagaccacataca
cctaaaatgcttaataaagattcggagtattcaccaacattagatacaagagttggagcg
ttaacacatagaagtccttatatgtgcattccatgcataacaccagatagggcggaaaag
cgtcagaatggcagaagatttaaagaaaatggagatcctatgtttactctaacaagtcaa
gatagacatggaatcttacaagttggaaacatagttgacacaggtaattggggtaatccg
caaagaggtagaatttattctccggatggaataagtccagcactaaataccgttggtggc
ggaggattagaacctaagatattgaaatacaaaagaactgagtacagaattcgcaaatta
actccaaaagaatgttggagattgatgggttttacagatgaagattttcaaaaggctaaa
gatgaaattagaccaatactcaatggcatttgtataaataaaaatgagtttatagcctta
gatggatatagattagcactaagaaaaggaaattttgaaactaaagaaccggttattgta
gcagcagatttaataaaagtaattaacaaagttaaatatgaatgtaatgttaaaatttac
tacaatgataattatgttaaatttaagtttgacgatttggaaatagttggttatagacga
caaggcaattatataaattataattctataattccagagaattataacactaaagttaca
ttaaaaattaaacctatacttgatattttaaaagattataaaaagaataagtttaaagtt
gtagatttagattttcaaaatgacaagttaattattaaagctaataacgatattgcaaca
gtagaagaaagtataactatagagttacaaggtgaacctttagaaatttcatttaatgca
gattatttaatagatgcatttaagaattatgacaatgcaactttagaattaacatattgt
gtaaatccaatggtaataagagaaaataataaattagatttagtgctaccagttagaaag
aaatag

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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