KEGG T00788: CbuK

Coxiella burnetii CbuK_Q154: CbuK_0424

Entry

CbuK_0424         CDS       T00788

Symbol

rpoB

Name

(GenBank) DNA-directed RNA polymerase beta chain

K03043

DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]

Organism

cbc Coxiella burnetii CbuK_Q154

Pathway

cbc03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:cbc00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CbuK_0424 (rpoB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbc03021]
    CbuK_0424 (rpoB)
   03400 DNA repair and recombination proteins [BR:cbc03400]
    CbuK_0424 (rpoB)
Enzymes [BR:cbc01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CbuK_0424 (rpoB)
Transcription machinery [BR:cbc03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CbuK_0424 (rpoB)
DNA repair and recombination proteins [BR:cbc03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CbuK_0424 (rpoB)

SSDB

Motif

Pfam:

RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RnfC_N

Other DBs

NCBI-ProteinID:

ACJ19707

Position

386417..390550

AA seq 1377 aa
MYMAQANSRSRNSATISYPEKRRARVNLGKREVEILKTPYLLETQIESYRKFLQKDIAAE
KREDNGLHAAFKSVFPITSYSGYAVLEYVGYSLGGESTLFDVEECKLRGLTYAAPLKVNM
RLVIYDKEAPAGKKAIKDIKEQEVYMGEIPLMTETGSLVINGTERVVVSQLHRSPGVFFE
HDKGKTHSSGKLLYSARVIPYRGSWLDFEFDPKDCLFVRIDRRRKLPATVILRALGYDTE
QILDMFYKTNHFHLNQETVTLDLIPQRLRGELAVVEIKDKKGKVIVEANRRISARHIRLI
EKAEINKLELPDDYLYGKVIGKTIIDKETGEIIAHANEEITAELLKNLRATKTASLDTLY
INEIECGPYVSDTLRLDTTTNQLEALVEIYRIMRPGEPPTKEAAESLFENLFFSPERYSL
SAVGRMKFNRRVGRKELTGLDVLSKEDIVDVLRVLVDIRDGKGDVDDIDHLGNRRIRSVG
EMAENQFRVGLVRVERAVKDRLSLADVENLMPQDLVNAKPVSAAIKEFFGSSQLSQFMDQ
NNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLAV
FARANEYGFLETPYRKVVDRVVTDETEYLSAIEEGDYYIAQANTNVDEKGRLVDDLISCR
YKGEFTLTTPDKINYMDVSPRQIVSVAAALIPFLEHDDANRALMGSNMQRQAVPTIRPET
PLVGTGMERTVAVDSGVTVIAKRSGVIDSVDASRIVVRVDRKETEDDDDIGVDIYNLTKF
TRSNQNTCINQHPIVEVGDKVQKGDVLADGPSTDIGELALGQNLLVAFMPWNGYNFEDSI
LISERLVEEDRFTTIHIQEFTCVARDTKLGPEEITSDIPNVGESALAKLDESGIVHIGAE
VNAGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVTPGITGTVIDVRIFTR
EGVKKDERTLEIEKAELSKVEKDLNDELRVREDALFENLEKLLTGRVAAGGPNKLAKGTK
ITKSYLADLPRQKWFEIRLQDDAATKRLEASHEHFKELRETRDAKLKDSRQKLTQGGDLA
PGVIKIVKVYLAVKRRIQPGDKMAGRHGNKGVISTIVPIEDMPYLEDGTPVDIVLNPLGV
PSRMNIGQVLETHLGWAAKGLGKKIGEMIEKGADAKELRKSLKPIYDLSKTQRFDLEALE
DPEIVTLAKNLRKGVPISSPVFDGATEEEIKQLLKMADLPTSGQAALYDGRTGKKFDRSV
TVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVAGRTRMYKNIVDGDHRMDAGMPESFNVLVKEIRSLAIDIGLEND

NT seq 4134 nt +upstreamnt +downstreamnt
gtgtacatggcgcaagcgaatagtagaagtaggaattcagctacgatttcttatcctgag
aaaagacgcgcgcgcgtcaatttagggaaacgcgaagtcgaaatattaaaaacgccttat
ttattagaaacacagatagaatcttatcgaaaatttttgcaaaaagatatcgccgcagaa
aaacgcgaagataacggtttgcacgctgcctttaaatctgttttccctattaccagctat
tctgggtacgcagtgcttgaatacgtaggttacagtttggggggagaatccacccttttc
gatgttgaggaatgtaaattacggggattgacctacgcggctcctttgaaagttaatatg
aggctggtcatttacgataaagaagcccctgccggtaaaaaagccatcaaagatattaaa
gagcaagaagtttacatgggcgaaattccattgatgacagagacgggcagtcttgtcatt
aacgggactgagcgcgtagtggtttcacagctccatcgttcccccggcgtcttttttgaa
catgacaaaggaaaaacgcattcatcaggaaaattattatattctgcccgcgtcattcct
tatcgtggttcgtggttggattttgaatttgatcctaaagattgtttatttgtgcgtatt
gatcgtcggcgaaagttgccggctacggttattttgcgcgcgcttggttatgataccgag
caaatcctcgatatgttttataaaaccaatcactttcatcttaaccaagaaaccgtcacc
ttagatttgattccgcagcggttacgaggcgagctggcggttgtcgaaatcaaagataaa
aaaggtaaagttatcgttgaagccaatcgtcgaatttcagcgcggcacattcgcctcatt
gaaaaagcagaaattaataaacttgaactgcccgacgattatttatatggcaaagtcatt
gggaaaaccattattgacaaagaaactggcgaaatcatcgcgcacgcgaatgaagaaatt
accgctgaattattaaaaaacttacgcgctacgaaaacggcgtcgctggataccttgtat
atcaacgaaatcgaatgcggtccgtacgtttctgatactttgcggttagataccacgacc
aaccaacttgaagcactcgtggaaatttatcgcattatgcgcccgggcgaaccacccaca
aaagaagcggcagaaagtttgtttgaaaatttattcttctcgccggagcgttatagctta
tcggcagtgggacggatgaaatttaatcgccgtgtagggcgtaaagaattaaccggattg
gatgttttatccaaagaagacattgttgatgtattgcgcgtattggtcgatattcgtgat
ggtaaaggggatgtcgatgatatcgatcatctgggaaatcgacgtatccgaagtgtgggt
gaaatggcggaaaatcaattccgcgtgggtcttgtgcgggtggagcgcgccgttaaagac
agactcagtttggccgacgtcgaaaacctcatgcctcaggatttagtaaacgctaaacct
gtttctgcagccattaaagaattttttggttcaagccaactatcgcaatttatggatcaa
aataatccgctctcagaaatcactcataaacgacgcgtatccgccttgggaccgggagga
ttaacgcgagaacgtgcggggtttgaagtacgtgacgtgcacgtgacacactatggccga
gtttgtcccattgaaacgcccgaaggtcctaatatcgggttaattaactctttagctgtt
tttgctcgggctaatgaatatggatttttagaaacgccttatcgtaaagtcgttgatcgt
gtagtgactgatgaaacggagtatttgtcagctattgaagaaggtgattattacattgcg
caagccaataccaatgtcgatgaaaaagggcggctagtcgatgatttaatttcctgtcgg
tataaaggagagtttactttaacgacacccgataagattaattatatggatgtgtcgccg
cgacaaatcgtttccgttgctgctgcgttaattccttttttggaacacgatgacgctaac
cgtgcattgatgggatcaaacatgcaacgccaagccgtgcccaccattcggccggaaacc
ccattagtgggaaccggtatggagcgtaccgtagcagtggactcaggggtaacggtcatt
gctaagcgcagtggtgtcatcgactccgttgacgcttcgcgaatcgttgttcgcgtagac
cgaaaagaaacggaagacgatgatgacatcggtgtggatatctataacctaacgaaattt
actcgctctaatcagaatacctgcattaatcagcatcccattgtggaagtcggcgataaa
gtccaaaaaggagacgtattagcggatggcccctccaccgatatcggtgagttagcgctg
gggcaaaacttattagtcgcttttatgccgtggaacggatataacttcgaagattccatt
ttgatttctgagcgattggtggaagaagatcgttttaccaccatccatattcaggaattt
acctgtgtggcccgcgatactaaattagggccggaagaaatcacttcggatattcccaac
gtcggtgaaagtgcgttggcgaaattggatgagtccggcattgtccacatcggcgctgag
gttaatgccggcgatattttagtcggtaaagtcactcctaaaggagaaacgcaacttaca
ccggaagaaaaattattgcgcgccattttcggtgaaaaagcttcagatgtaaaagatact
tcgttacgcgtaacgccggggattaccggaactgtcattgatgttcgtatctttactcgg
gaaggcgttaagaaagacgagcggacgttagaaatagaaaaagccgaattgtcgaaagtt
gaaaaagatctcaatgacgagctgcgggttcgggaagacgcgctgtttgaaaatttagaa
aaattgctgacgggacgcgttgctgcgggtggcccgaataaactcgctaagggaacgaaa
attacaaaaagttacttagcagatttaccccgacagaaatggtttgaaattcgtttgcaa
gacgatgctgccaccaagcggctcgaagcttctcacgagcattttaaagaattgcgtgaa
acgcgagatgctaaattaaaagactcacgacaaaaattaacgcaaggcggtgatttagcg
ccgggcgtcattaaaattgtgaaagtttatcttgctgtaaaacgacgcattcaacccggt
gataaaatggcagggcgtcacggtaataaaggcgtcatttccaccatcgtccctatcgaa
gacatgccctatttagaagatggaacgccggtggatatcgttcttaatcctttaggcgta
ccgtcgcggatgaacatcggtcaagtgctggaaactcatctgggttgggccgcgaaggga
ttaggcaaaaaaattggtgaaatgattgaaaaaggtgcggacgccaaagagctgcgcaag
tcattgaaacccatttatgatttgagtaagacccagcgctttgatttagaggcattagag
gaccctgaaattgtgacgttggcgaaaaacttgcgaaaaggtgtgcccatttcctcgcct
gtattcgatggagcgaccgaggaagaaattaagcagctgctgaaaatggcagatcttccc
acgtccggccaagccgcattgtacgatggtcgaaccggcaaaaaattcgatcggtcggtt
accgtcggttacatgtacatgctgaagcttaaccatctagtcgatgataagatgcacgcg
cgctccacaggatcgtacagtttagtgacgcagcaacccctcggtgggaaggctcaattt
ggcggtcaacggttcggtgaaatggaagtgtgggccttggaagcctacggagcggcttat
acgttgcaggaaatgttgacggttaaatccgacgacgtagctggccgcacgcgcatgtac
aaaaacatcgtcgacggcgatcatcgaatggatgcaggtatgccggagtcatttaacgta
ttagtaaaagaaatccgttcgttggcgattgatattggtttggagaatgattga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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