KEGG   Clostridium beijerinckii NCIMB 8052: Cbei_0180
Entry
Cbei_0180         CDS       T00547                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cbe  Clostridium beijerinckii NCIMB 8052
Pathway
cbe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Cbei_0180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbe03021]
    Cbei_0180
   03400 DNA repair and recombination proteins [BR:cbe03400]
    Cbei_0180
Enzymes [BR:cbe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Cbei_0180
Transcription machinery [BR:cbe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Cbei_0180
DNA repair and recombination proteins [BR:cbe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Cbei_0180
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 Big_7 RAD51D_N
Other DBs
NCBI-ProteinID: ABR32370
UniProt: A6LPU0
Position
206633..207580
AA seq 315 aa
MLEIEKPIIECIEANEDGTYGKYVVEPLERGYGITLGNALRRILLSSLPGVATTSVKIDG
VLHEFSTVQGVKEDVTELILNIKSLALRMNGEGPKVIYIDAKGPGEVTGADIKTDGDVEV
VNKNLHIATLDNDGRLYMELTVNKGRGYVTQNKNKSDELPISAIAVDSIYTPVKRVNFTV
DNTRVGQITDYDKLTLEIWTNGTIKIDEAISLSAKILIEHFKLFMSLTDNTNDVEIMIEK
EDDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELATKSMDDMMKVRNLGKKSLEEVE
RKLKELGLALKLTEE
NT seq 948 nt   +upstreamnt  +downstreamnt
atgttagaaatcgaaaagccaataatagaatgtatagaagctaatgaagatggtacttat
ggtaagtacgttgttgaaccacttgaaagaggatacggtattacattaggaaatgcccta
agaagaatactattatcatcccttccaggagttgcaacaacctctgtcaaaattgacggt
gtgcttcatgagttttctactgttcaaggagttaaagaagatgttactgaattaattctt
aatatcaaatcattagctctaagaatgaatggtgaaggtccaaaagttatttatattgat
gctaaaggaccaggagaagttactggagcagatataaagactgatggtgatgttgaagtt
gttaataagaatttacatattgcaactttagataacgatggaagactttatatggaattg
acagttaataaaggaagaggatatgttactcagaataaaaataagagtgatgaattacca
atttctgctatagcagttgattctatttatacaccagtaaaaagagttaattttactgtt
gataatacaagagttggtcaaattactgattatgataaattaactttagaaatttggact
aatggtactataaaaatagatgaagctattagtttatcagcaaaaatacttattgaacac
tttaaattattcatgtcattaacagataatactaatgacgttgaaataatgatagaaaaa
gaagacgataagaaagaaaaagtcctagaaatgactgtagaagaacttgatttatcagtt
agatcatataactgtttaaaaagagccggaattaatacagtccaagaacttgctacaaaa
tctatggatgatatgatgaaagtaaggaatctaggaaagaaatctttagaagaagttgaa
agaaagcttaaagaattaggtttagccctaaaactaaccgaggagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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