KEGG   Clostridium beijerinckii NCIMB 8052: Cbei_4850
Entry
Cbei_4850         CDS       T00547                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
cbe  Clostridium beijerinckii NCIMB 8052
Brite
KEGG Orthology (KO) [BR:cbe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cbe03009]
    Cbei_4850
Enzymes [BR:cbe01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Cbei_4850
Ribosome biogenesis [BR:cbe03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Cbei_4850
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Methyltransf_15 Cons_hypoth95 PrmA Methyltransf_25 N6_N4_Mtase MTS Met_10 UPF0020 Methyltransf_11 TPMT
Other DBs
NCBI-ProteinID: ABR36956
UniProt: A6M2X6
Position
complement(5675308..5676687)
AA seq 459 aa
MLERNKEYIVKIDSLGYEGEGVAKIDGYPIFIPGALIGETVKTEIIKNKKNYSYGKLIDI
VEKCDERIIPECNYYEKCGGCTLMHSNYDSQLKFKYNRVKDCIERIGGLSGDIVKNTIGM
EFPYRYRNKGIYSIALTDNELSMGFFSEKTHEVVDMDKCLIQDEETDKIIKIIRNWMKKY
SILPARKDNLFFSEGLIRNVMVRNGFKTNEIMVVLITTDKEIPKKEELIKDIRLEVENLK
GVIQNISTKNNSLVLGDKCITLWGQDYISDYIGKYKFNISPLSFFQINPIQTEVLYNKAL
EYADLSGDEIVFDAYCGAGTITLFLSQNARKVYGVEIVEQAIDNAIDNAEINGIDNSEFY
VGKSEEVIPELIKNGIKPDIIVVDPPRKGCDIKLLNAIGEAKPKRVVYVSCDPSTLARDL
KHLEGFGFKTIEVQPVDMFPNTKHVETVALLTKRYVSPQ
NT seq 1380 nt   +upstreamnt  +downstreamnt
gtgttagagagaaataaagagtatattgtaaaaatagattccttaggatatgaaggtgag
ggtgtcgcaaagatagatggatatccaatatttataccaggagctttaataggggaaact
gtaaagacagaaataatcaagaataaaaagaattattcttatggaaagcttatagatata
gtggaaaaatgtgacgaaagaattatacctgaatgtaattattatgaaaaatgtggtggt
tgtactttaatgcattctaattatgattcacaattaaaatttaaatacaatagagttaag
gattgcatagaaagaattggtggattatcgggggatatagttaaaaatactatagggatg
gaatttccgtacagatatagaaataagggaatatattcaattgcattgacagacaatgaa
ctttcaatgggcttttttagtgaaaaaacacatgaagtggtcgatatggataagtgtcta
attcaagatgaagaaactgataaaatcataaaaataataagaaattggatgaaaaagtat
tctatattacctgctaggaaagataatttattttttagtgaaggactaattagaaatgta
atggtgagaaatggttttaaaactaatgagattatggtagttttgattactaccgataag
gaaattccaaagaaagaagaactgataaaggatattaggttagaggttgaaaatttaaag
ggagtaattcagaatataagtactaaaaataatagtctagttctcggtgacaagtgtata
actttgtgggggcaggattatatatctgattatataggtaaatataaatttaatatttcg
ccattatctttctttcaaataaatcctattcaaacagaagtactttataataaagctttg
gaatatgcagatctgagcggagacgagattgtttttgatgcatattgcggtgctggcaca
ataacattatttttatctcagaatgcaagaaaagtctatggagttgaaatagtagaacaa
gcgatagataatgcgatagataatgcagaaataaatggaatagacaactcggaattttat
gtgggaaaatctgaagaagtgattccagagttaataaaaaatggaatcaaaccagacata
atagttgtggatcccccaagaaagggctgtgatattaagttgctaaatgctataggagaa
gctaagcctaaacgagtagtgtatgtatcatgtgatcctagtactttagcaagagattta
aaacatttagaagggtttggatttaaaacaatagaagtacagcctgtagacatgtttcca
aatacaaagcatgtggaaactgtcgcgttattaactaagagatatgtaagcccacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system