KEGG   Clostridium beijerinckii NCIMB 14988: LF65_00217
Entry
LF65_00217        CDS       T04773                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cbei  Clostridium beijerinckii NCIMB 14988
Pathway
cbei03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cbei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LF65_00217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbei03021]
    LF65_00217
   03400 DNA repair and recombination proteins [BR:cbei03400]
    LF65_00217
Enzymes [BR:cbei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LF65_00217
Transcription machinery [BR:cbei03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LF65_00217
DNA repair and recombination proteins [BR:cbei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LF65_00217
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 Big_7 RAD51D_N
Other DBs
NCBI-ProteinID: AJG96894
UniProt: A0A0B5Q3X7
Position
210390..211337
AA seq 315 aa
MLEIEKPIIECIEANEDGTYGKYVVEPLERGYGITLGNALRRILLSSLPGVATTSVKIDG
VLHEFSTVQGVKEDVTELILNIKSLALRMNGEGPKVIYIDAKGPGEVTGADIKTDGDVEV
VNKNLHIATLDNDGRLYMELTVNKGRGYVTQNKNKSDELPISAIAVDSIYTPVKRVNFTV
DNTRVGQITDYDKLTLEIWTNGTIKIDEAISLSAKILIEHFKLFMSLTDNTNDVEIMIEK
EDDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELATKSMDDMMKVRNLGKKSLEEVE
RKLKELGLALKLSEE
NT seq 948 nt   +upstreamnt  +downstreamnt
atgttagaaatcgaaaagccaataatagaatgtatagaagctaatgaagatggtacttat
ggtaagtacgttgttgaaccacttgaaagaggctatggtattacattaggaaatgcccta
agaagaatactattatcatctcttccaggagttgcaacaacctctgtcaaaattgatggt
gtgcttcatgagttttctactgttcaaggagttaaagaagatgttactgagttaattctt
aatatcaaatcattagctctaagaatgaatggtgaaggtccaaaagttatttatattgat
gctaaaggaccaggagaagttactggagcagatataaagactgatggtgatgttgaagtt
gttaataagaatttacatattgcaactttagataacgatggaagactttatatggaattg
acagttaataagggaagaggatatgttactcaaaataaaaataagagtgatgaattgcct
atttcagctatagcagttgattctatttatacaccagtaaaaagagttaattttactgtt
gataatacaagagttggtcaaattactgattatgataaattaactttagaaatttggact
aatggtaccataaaaatagatgaagctattagtttatcagcaaagatacttattgaacat
tttaaattattcatgtcattaacagataatactaatgatgttgaaataatgatagaaaaa
gaagacgataagaaagaaaaagtcctagaaatgactgtagaagaacttgatttatcagtt
agatcatataactgtttaaagagagctggaattaatacagtacaagaacttgccacaaag
tcgatggatgatatgatgaaggtaaggaatttaggaaagaaatctttagaagaagttgaa
agaaagcttaaggaattaggtttagcactaaaactaagcgaggagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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