KEGG   Clostridium beijerinckii NCIMB 14988: LF65_05467
Entry
LF65_05467        CDS       T04773                                 
Name
(GenBank) ABC-ATPase UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
cbei  Clostridium beijerinckii NCIMB 14988
Pathway
cbei03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LF65_05467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbei03400]
    LF65_05467
DNA repair and recombination proteins [BR:cbei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LF65_05467
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LF65_05467
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase AAA_21 AAA_33 nSTAND1 AAA_22 ATPase AAA_18 AAA_25 AAA_15 nSTAND3 APS_kinase NACHT DnaJ_CXXCXGXG SLFN-g3_helicase DUF4350 Viral_helicase1 cobW NMDAR2_C Septin
Other DBs
NCBI-ProteinID: AJH01982
UniProt: A0A0B5QUS8
Position
complement(6131208..6134033)
AA seq 941 aa
MNDKIVIKGAKVNNLKNVSLEIPRDKLVVLTGLSGSGKSSLAFDTLYAEGQRRYVESLSS
YARQFLGQMDKPNVEYIEGLSPAISIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIPH
CPKCGKEITKQSVDQIVDKIMGYGDRSKLQVLSPVVKGRKGTHEKILEHIKKSGFVRARI
DGEIYDLTEEEVKLDKNKKHNIEAVIDRIVIKEGIEGRLTESVEASLKMGEGLVIISVIG
GEETLFSENFACPDCGISIDELSPRLFSFNAPYGKCDHCDGLGSLMEIDEKLVIPNRELS
VMEGAIASWGSGRLKEDSWTYAILQALTKEYGLDLSKPIKDLDKEHVDLLFYGTGGKKLK
IEYVKDGVKAIYSYAFEGEINALSRRYRESNSDLIKGEIEQYMSNDSCPKCKGARLKKEV
LAVTVGGKNIYEFTSMSIKEELEFINGVEFSEKNKLISEQIIKEIKNRLQFLLDVGLDYL
SLSRNSGTLSGGESQRIRLATQIGSALMGVLYILDEPSIGLHQRDNDRLIHTLKNLRDVG
NTVVVVEHDEDTMKEADYIVDIGPGAGEHGGEVVVAGTLDEVKACEKSITGQYLTGRKSI
QIPAARRKGNGQKIKIVGAKENNLKNINVSIPLGTLTMVTGVSGSGKSTLVNEILYKGLN
RLVNKSKNPVGNHKEIVGYENIDKIIDINQSPIGRTPRSNPATYTGTFDIIRELFSQTTE
AKMRGYKQGRFSFNVKGGRCEACSGDGIIKIEMQFLSDVYVPCEVCKGKRYNRETLEVKY
KGKNIDDVLKMTVEEALKFFENIPRIENKLRTLNDVGLGYIRLGQPSTQLSGGEAQRIKL
AYELSKRSTGKTLYILDEPTTGLHVDDVSRLIEILQSLVETGNTVVVIEHNLDMIKCADY
LIDLGPEGGDKGGTIIKCGTPEELCKVQESYTGKYLKDVLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgaacgataagatagtaataaaaggtgcgaaagttaataatttaaagaatgtaagttta
gaaataccgagagataaattagttgtacttacaggattatcaggctcaggtaagtcatca
ttggcctttgatacattatatgctgaagggcaaagaagatatgtggaatctttatcttct
tatgcacggcaatttttaggacaaatggataaaccgaatgtagaatatatagaaggatta
tcaccggcaatatcaatagatcaaaagactacaagtaaaaatccaagatcaacagttgga
acaataactgaaatatatgattatttgagattattatatgcaagagtaggaattcctcac
tgtccaaagtgcggtaaagaaattactaaacaatctgttgatcagattgttgataaaatt
atgggttatggagatagatctaaacttcaagtattatcacctgtagttaaagggagaaaa
ggaactcatgaaaagatattagaacatataaagaagagcggttttgttagagcaaggatt
gatggggaaatctatgacttaactgaagaggaagtaaagttagataaaaataaaaagcat
aatattgaagctgttattgatagaattgtcataaaggaagggattgaaggtagacttaca
gaatctgtagaagcgtctttaaagatgggcgaaggattagttataattagcgttattgga
ggagaagaaactttatttagcgaaaattttgcttgcccagattgtggaataagtattgat
gagctatcgcctagattattttcatttaatgctccatatggaaagtgcgatcattgtgat
ggtcttggaagtcttatggagatagacgaaaagcttgttatacctaatagagagctaagt
gttatggaaggagctatagcaagctggggaagtggaagactaaaagaagattcttggaca
tatgcaatacttcaggctctaactaaagagtatggattagatttaagcaagcctataaaa
gatttggataaagaacatgttgatttattgttttatggaacaggtgggaaaaaacttaaa
attgaatatgtgaaagatggagttaaagctatttatagttatgcatttgaaggggaaatt
aatgcattaagcagaaggtatagagagagtaattcagatcttataaagggtgaaatagag
caatacatgagcaatgattcatgcccaaaatgtaaaggcgctaggttaaaaaaagaagtg
ctagcagttactgttggtggaaaaaatatatatgaatttacaagtatgtcaataaaagaa
gaacttgagtttataaatggagtggaattttcagaaaaaaataaacttataagtgagcag
attataaaagagattaaaaatagattgcagtttttattagatgttggtttagattactta
agtttatcaagaaattctggaaccttatcaggtggggaatcacaaagaataaggcttgca
acacaaattggttcagcacttatgggagtcctatatatattagatgaaccaagtattgga
ttgcatcaaagggataatgataggctaatacatactttgaaaaatctaagagatgttgga
aatacagtagtagttgtagaacacgatgaagatactatgaaggaagcagattatattgtt
gatattggaccgggtgcaggagagcacggaggagaagtagttgttgctggaacacttgat
gaagttaaggcatgtgaaaaatcaataacaggtcaatatttaactggaagaaaatcaatt
caaattccggcagcgagaaggaaaggtaatggacaaaaaataaaaattgtaggcgctaag
gaaaataatttaaaaaatataaatgtttcaattcctcttggtactttaactatggttaca
ggagtttctgggtccggaaaaagtactctagtaaatgaaatactttataaagggttaaat
agattagtaaataagagcaaaaatccagtaggaaaccataaagaaatagttggttatgag
aatattgataaaataatagatataaatcaaagtccgattggaagaacacctcgttctaat
ccggcaacttatacaggcacatttgatataattagagagttattttcacaaactacggaa
gctaaaatgaggggttataagcaaggcagatttagttttaatgttaaaggtggaagatgt
gaagcttgttctggagatggaataataaaaatagaaatgcaatttctatcggatgtttat
gttccatgtgaggtgtgtaaaggaaagaggtataatagagaaactttagaagtaaagtat
aaagggaaaaatatagatgatgtattaaaaatgacagttgaagaagcgttgaagttcttt
gaaaatatacctagaattgagaataagttgaggacattaaatgatgtaggacttggatat
attagattaggtcagccttcaactcaattatcaggaggagaagctcaaagaattaagtta
gcatatgaattatcaaagagaagcacaggaaaaactctatatatattggatgagccaaca
acaggactacacgtagatgatgttagtagattaatagaaatacttcaaagtttagttgaa
acaggaaatactgtagtagtaattgagcataatttagatatgataaaatgtgcagattat
ttgattgatttaggtccagaaggcggagataagggtggaaccatcataaaatgtggaacg
ccagaagaattgtgtaaggttcaagaatcttatacaggtaaatatttgaaagatgtgctt
aaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (33)   

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