KEGG   Cognaticolwellia beringensis: B5D82_16845
Entry
B5D82_16845       CDS       T05628                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
cber  Cognaticolwellia beringensis
Brite
KEGG Orthology (KO) [BR:cber00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cber03032]
    B5D82_16845
   03400 DNA repair and recombination proteins [BR:cber03400]
    B5D82_16845
Enzymes [BR:cber01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B5D82_16845
DNA replication proteins [BR:cber03032]
 Prokaryotic type
  DNA Topoisomerases
   B5D82_16845
DNA repair and recombination proteins [BR:cber03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B5D82_16845
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C PLC-beta_C
Other DBs
NCBI-ProteinID: ASP49290
UniProt: A0A222GBS0
Position
4004096..4006828
AA seq 910 aa
MTDLANNIAPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHSILADLDKETVDYVANYDGTEMIPAVMPTRIPNLLVNGTSGIAVGMAT
NIPPHNLTEVINGCLAVIENSDITFEELLEFIPGPDFPTAGIISGRAGIQEAYLTGRGKI
KIRARARIEVDEKSGKETIVVFELPYQVNKARLIEKMADLVKEKRLEGISALRDESDKDG
MRMVIEVKRGEVGEVILNNLYKLTQMQVSFGLNMVALTNGQPKLFNLREMLDAFILHRRE
VVTRRTIFELRKARERAHLLEGLSIALSNIDPIIALIKNSPTPSEAKEQLLAQGWDLGLV
SDMLAAAGDDAARPEWVEEEFGIRDGLYFLTPPQAQAILDLRLHKLTGLEHEKIISEYKA
LLDVIAELLYILATPSRLMEVIREELEAIRDEFGDERRTEITNASHDLSMEDLITEEDVV
VTLSHEGYVKYQILSDYQAQRRGGKGKAATKMKEEDFIERLLIANTHDTILCFSDRGKLY
WLKVFQLPLASRTARGRPIVNILPLEEGERITAILPVREYAEDKFIIMATASGTVKKTAL
TAYKNQRANGIIALNLRDDDTLIGVDITDGENDIMLFSDAGKVVRFNEKKRDSETGEIKV
DPETGEQLWALKPIGRTGTGVRGIKLEGDQKVVSLIVPKNDGPILTITENGYGKRTALEE
YPAKSRATKGVVSIKVSERNGPVVGAVQVEEQDEIMLITDNGTLVRTRVGEVSVIGRNTQ
GVRIIRTIEGEHVVALQRIDEIEEVEVFEEDENGEPVPTLAAVEGEQVDTPETDESEGDD
TPLDNDDTQE
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgaccgatttggcgaataatattgctcctgtcaatattgaggatgagctaaaaagctcc
tatttagattacgcaatgagtgtaatcgtaggtcgtgcattaccagatgtgcgtgatggc
ttaaagccagtgcatcgtcgcgtactttttgcgatgaacgtgttaggcaacgatttcaac
aagccgtacaaaaagtctgcacgtgttgttggtgatgttatcggtaagtatcacccacat
ggtgataccgctgtttatgacacaattgttcgtatggcgcaggatttttcattacgctat
atgcttgtagatggccaaggtaacttcggttctgttgatggtgattcagcggctgcaatg
cgttataccgaaattagaatgtcgaaaattgcacattctattttggctgatttagataaa
gaaacggttgattacgttgccaactacgacggcacggaaatgataccagccgttatgcca
acgcgcattcctaacttactggttaatggtacttcaggtatcgcggtaggtatggcaaca
aatattccgcctcataacctcactgaagttatcaatggttgtttagctgttattgaaaat
agcgatatcacttttgaagaattattagagtttataccaggacctgatttcccaactgcg
ggtattatcagtggtcgagcgggtattcaagaagcttaccttaccggtcgtggtaaaatt
aagattcgtgctagagctagaatcgaagtcgatgaaaaatcgggtaaagaaacgattgtt
gtgttcgaattaccttatcaagttaacaaggctcgtttgattgagaaaatggctgacttg
gtaaaagaaaaacgcttagaaggtatttctgccttacgtgatgagtctgataaagacggt
atgcgtatggtaatcgaagtgaaacgtggtgaagtaggcgaagttattttaaataactta
tataagcttactcaaatgcaagtttcatttggtttgaatatggtggcattgaccaacggt
cagcctaaattattcaacttacgagaaatgctcgatgcctttattttacatcgtcgtgaa
gttgtaacacgtagaaccatctttgaattgcgcaaagcacgtgaacgcgcacatttactt
gaaggtttgtcgattgcactttctaacattgacccaataattgctctcattaagaactca
ccgacacctagtgaagcaaaagagcaattattagcacagggctgggacttaggtcttgtt
tctgacatgttagctgctgcgggtgacgacgctgcacgccctgaatgggttgaagaagaa
tttggtattcgtgatggtctgtatttcttaacgccaccacaagcacaagccattctagac
ttacgcttacataagttaacgggtctagaacacgaaaaaattatcagtgaatataaagcc
ttattagatgtgattgcagaattactttatattttggcaacgccttctcgattaatggaa
gttattcgtgaagagcttgaagcgattcgtgatgagtttggtgatgagcgtcgtactgaa
attactaatgcttcacatgacttatcgatggaagacttgatcactgaagaagacgtggtg
gttacgctttcacatgaaggttatgttaagtatcaaatattaagcgattaccaagcgcaa
cgtcgcggtggtaaaggtaaagcagcaactaagatgaaagaagaagatttcattgaacgt
ttattgattgctaatacccatgatactattttatgtttctcagatcgcggtaagctttac
tggttgaaggtattccaattaccattagcaagtcgtacagcacgtggtcgtccaattgtg
aatattctgccgcttgaagaaggcgagcgtattacagcaattctgccagtacgtgaatat
gcagaagataaatttattatcatggctactgcctctggtaccgtgaagaaaactgcgttg
acagcatataaaaaccaacgtgccaacggtattattgctttgaacttacgtgatgacgat
accttaattggtgttgatattaccgatggtgagaatgatattatgttgttctctgacgcg
ggtaaagttgtacgctttaacgagaaaaaacgtgacagcgaaaccggtgagataaaggtt
gatcctgaaactggcgaacaactatgggcattaaaacctattggtcgtactggtacaggt
gttcgtggtattaagttagagggcgatcaaaaagttgtgtctttaattgtaccgaaaaac
gatggcccgatattgaccattactgaaaatggctatggtaagcgtactgctttggaagaa
taccctgcgaaaagtcgagcgactaaaggtgttgtttcaattaaagtcagtgagcgtaac
ggcccagtagttggcgcagtacaagttgaagaacaagacgaaataatgttgatcacagac
aacggtacattagtgcgtacccgtgttggtgaagtcagtgttattggtcgtaatactcaa
ggtgttcgtattattcgtacgattgaaggcgaacatgttgttgccttacaacgtatcgat
gaaatagaagaagttgaagtatttgaagaagatgagaatggcgagccagtgccaacactt
gcagcagttgagggtgaacaagtagatacacctgaaactgatgagagtgaaggcgatgac
actccactcgataatgacgatactcaagagtaa

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