KEGG   Clostridium botulinum F Langeland: CLI_0592
Entry
CLI_0592          CDS       T00563                                 
Name
(GenBank) putative ATP-dependent helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
cbf  Clostridium botulinum F Langeland
Pathway
cbf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CLI_0592
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLI_0592
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbf03021]
    CLI_0592
   03400 DNA repair and recombination proteins [BR:cbf03400]
    CLI_0592
Enzymes [BR:cbf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     CLI_0592
Transcription machinery [BR:cbf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CLI_0592
DNA repair and recombination proteins [BR:cbf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CLI_0592
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD Helicase_C PDDEXK_1 ResIII PhoH IstB_IS21
Other DBs
NCBI-ProteinID: ABS39918
UniProt: A7GAR7
Position
614804..617158
AA seq 784 aa
MECKGEVNISVRNLVEFILRNGDIDIGYLGGSRAQEGIKAHKKLQKIRMESATPLLMIEY
EKEVLLKYAIEYKDFLFKVEGRADGIIIENDSITIEEIKTTTKNLDEIKDNLLHWAQAKC
YAFIYSKEKNLEKINVKLTYYNIKNENIKSIDKTFEIQELEEFFYDIIHKYYVWIEFNYR
FKQERNRDIKLLKFPFKEYREGQRKLAVSVYKTISENKNIFIEAPTGIGKTISTIFPSIK
AIGEGKIDKIFYLTAKNTTRDFVLSNFKNMVNRGMAFKVITLISKEKICLKEEFKCSSEK
CEFAKGHFDRINEAILDILNNENIIDETVIKKYALKHKVCPFEFSLDISLWCDGIICDYN
YVFDPRVHLRRFFSDGKDDFVLLIDEAHNLLDRSREMFSSSISKNNVLSLRKSIKDKSKA
LYRILGKINKELLDIKKIYEVDNYYMEKEKPEKLQILLNNFTAEIEVLMMKGNFQIDDEL
LNFYFEALYFLKICELYGDNYITYGEEYNSDFTIKLFAIDTSGLLNEILKKSKANIFFSG
TFSPIKYFREVLGGDDEDYVLKLNSPFPIENHRILIGYNVSTKYKNRCKSYENICDYINM
ACKIKKGNYMVFFPSYKYMKEVFLLYKEKYPEENVIVQNSSMSDEEREEFIDKFEKEAEN
VIGFCVLGGIFSEGIDLTGDKIIGAIIIGVGLPQICVERNLIKNYYDDKKQSGFQYSYIY
PGMTKVMQAAGRVIRTELDKGIILLIDERFNSYSYKEIFPKHWYPNINVKNEKELEGALK
EFWN
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggaatgcaagggtgaagtgaatatatccgttagaaatttagtggagtttatattaaga
aacggagatattgatattggatatttggggggaagcagagctcaagaagggataaaagca
cataagaagttgcaaaaaattaggatggaaagtgctacccctttactcatgattgaatat
gagaaagaagttttattaaaatatgctatagaatataaagattttttatttaaagtagag
ggaagagcagatggaattattatagaaaatgactctattactatagaagagattaagact
acaactaaaaacttggatgaaattaaagataatttactacactgggctcaagctaagtgt
tacgcctttatttattcaaaggagaaaaatcttgaaaaaattaatgttaaattaacttat
tataatattaaaaatgaaaacattaaaagtatagataaaacttttgaaatacaggaatta
gaagaatttttttatgatattatacataaatattatgtttggatagagtttaattataga
tttaagcaggaaagaaatagggacattaaattattaaagtttccctttaaagaatataga
gaaggccaaagaaaattagctgtatctgtttataagactataagtgaaaataaaaatata
tttatagaagctcctacaggtatagggaaaactatttctacaatattcccaagtattaag
gctataggagaaggtaaaatagataaaattttttatttaacagctaagaatactacaaga
gattttgttttgagcaattttaaaaatatggtaaataggggaatggcttttaaagttatt
actttaatttccaaggaaaagatttgtcttaaagaggagtttaaatgttcatcggaaaag
tgtgagtttgctaaaggccattttgatagaataaatgaagctatattagatattttaaat
aatgaaaatattatagatgaaaccgttataaaaaaatatgcattaaaacataaagtttgt
ccctttgaattttctttagatataagtttatggtgtgatgggataatctgtgattataat
tatgtttttgatcctagagtacatttaagaagatttttttctgatgggaaggatgatttt
gtattactgatagatgaagctcataatttattagatagatctagagaaatgttttcttca
tctatatctaaaaataatgttttaagtttaagaaagtctattaaagataaaagtaaagct
ttatatagaattttaggaaaaataaataaagaacttttagatataaaaaaaatatatgaa
gtggataattattatatggaaaaagaaaagccagaaaagctgcaaatattattaaataat
tttacagcagagattgaagtgcttatgatgaaaggaaactttcaaatagatgatgaatta
cttaatttttattttgaggctttatattttctaaagatatgtgaattatatggagataat
tatataacctatggagaagaatataatagtgattttacaattaaactttttgctatagat
acttcaggtttattaaatgaaattttaaaaaagtcaaaggcaaacatatttttttcagga
accttttctcctataaaatatttcagagaagttttaggaggagacgatgaagattatgtt
ttaaaattaaattctccttttccaatagaaaaccataggattttaataggttacaatgtt
tctacaaaatataaaaatagatgcaaaagctatgagaatatatgtgattatataaatatg
gcctgcaaaataaagaaaggaaactatatggtttttttcccatcctataaatatatgaaa
gaagtttttttattatataaagaaaaatatccagaagagaatgttatagttcaaaattct
tctatgagtgatgaagagagagaagaatttatagataaatttgaaaaagaagcagaaaat
gtaataggtttttgtgtattgggtgggattttttcagaaggaattgatttaacaggggat
aaaataataggagctataataataggagtaggattaccacaaatatgtgtagaaagaaat
ctaataaagaattattatgatgataagaaacagtctggctttcagtattcatatatttat
ccgggaatgactaaagttatgcaggctgctggtagagtaataagaacagagctggataaa
ggaataatactacttattgatgaacggtttaatagttattcctataaagagatattccct
aaacactggtatcctaatattaatgtgaaaaatgagaaagaattagaaggagctttaaag
gaattttggaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system