KEGG   Clostridium botulinum Ba4: CLJ_B0021
Entry
CLJ_B0021         CDS       T00895                                 
Symbol
serS_1
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
cbi  Clostridium botulinum Ba4
Pathway
cbi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cbi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CLJ_B0021 (serS_1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cbi01007]
    CLJ_B0021 (serS_1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbi03016]
    CLJ_B0021 (serS_1)
Enzymes [BR:cbi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     CLJ_B0021 (serS_1)
Amino acid related enzymes [BR:cbi01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   CLJ_B0021 (serS_1)
Transfer RNA biogenesis [BR:cbi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CLJ_B0021 (serS_1)
 Prokaryotic type
    CLJ_B0021 (serS_1)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N NPV_P10 LRRFIP KASH_CCD TMF_TATA_bd DUF16 Cauli_AT BLOC1_2
Other DBs
NCBI-ProteinID: ACQ53357
UniProt: C3KXS1
Position
22477..23757
AA seq 426 aa
MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE
VPKLKKEGKDVSNIVAEMKNLSEEIKGFDATLAKIDEKIQYIMLRIPNIPNPQVPDGETD
EDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFQRAGKVTGSRFTFYKGLGARLERAVI
SYFLDTHTEKHGYIEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPVTN
LYRDEVLKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYDE
LEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNFED
FQARRANIRYKEDSKAKPQYVHTLNGSGVAIGRTVAAILENYQNEDGSVTIPEVLRPYMG
GKEAIK
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgttagatttaaaaagaataagaaataattcaaatgaaataaaagaagcattaaacaat
agaggagaaaagtttgatgtaactgtaattgatgaagtcttaaaattagatgaggaaaga
agaaacattttagttaaagttgaggttttaaaaagtaagagaaatcaagtttcttctgaa
gttcctaaactaaaaaaagaaggaaaagatgtatctaatatagtagctgaaatgaagaat
ttatcagaagaaataaaagggtttgatgctactttagctaaaatagatgaaaaaatacaa
tatataatgcttagaatacctaatataccaaacccacaagttccagatggagaaacagat
gaggataatatagaaataagaaattggttagaaccaacaaaatttgattttgaacctaaa
gcacattgggatataggaacaaatttaaatattcttgattttcaaagagctggaaaagta
acaggatcaagatttactttttataaaggattaggggctagattagaaagagcagtaata
tcttattttttagatactcatacagaaaaacatggttatattgaaatattaccaccttat
atggtaaatagaacaagtatgataggaacaggacaattacctaaatttgaagaagacgct
tttaaaatttcagaggatgattactttttaataccaactgcagaggttcctgtaactaat
ttatatagagatgaagtcttaaaaggtgatgaattaccattaaaacatgtagcttatagt
gcttgttttagatcagaagcaggttcagcaggtagagatacaagaggtcttgttagacaa
catcaatttaataaagtagagcttgttaaatttacaaaaccagaacagtcttatgacgaa
ttggaaaaattaactaatgatgctgaaacagtattaaaagagttaggtattccatataga
gttgtaagaatatgcaaaggtgatttaggatttacagctgcattaaaatatgatttagaa
gtttggatgccaagttacaatagatatgttgaaatatcaagctgtagtaactttgaagac
ttccaagcaagacgtgctaatataagatataaagaagattcaaaagcaaaaccacaatat
gttcatacattaaatggatcaggagttgctattggaagaactgttgcagctatacttgaa
aactatcaaaatgaagatggatcagttacaataccagaagtgttaagaccttatatggga
ggaaaagaagcaataaaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (31)   

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