KEGG   Clostridium botulinum B Eklund 17B (NRP): CLL_A3447
Entry
CLL_A3447         CDS       T00696                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cbk  Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03030  DNA replication
cbk03430  Mismatch repair
cbk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLL_A3447 (dnaX)
   03430 Mismatch repair
    CLL_A3447 (dnaX)
   03440 Homologous recombination
    CLL_A3447 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbk03032]
    CLL_A3447 (dnaX)
   03400 DNA repair and recombination proteins [BR:cbk03400]
    CLL_A3447 (dnaX)
Enzymes [BR:cbk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CLL_A3447 (dnaX)
DNA replication proteins [BR:cbk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CLL_A3447 (dnaX)
DNA repair and recombination proteins [BR:cbk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CLL_A3447 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA DnaX_C AAA_22 RuvB_N DNA_pol3_delta_C AAA_assoc_2 AAA_14 DUF815 AAA_18 AAA_5 AAA_24 POTRA_1 AAA_30 AAA_7 Mg_chelatase
Other DBs
NCBI-ProteinID: ACD22863
UniProt: B2TR55
Position
complement(3643538..3645178)
AA seq 546 aa
MGYTALYREWRPRTFNDVVGQEHITTTLKNEILNDRIAHAYLFCGTRGTGKTSTAKVMAK
ALNCFNIQDGEPCNECEMCKKINEGLSMDVTELDAASNNGIDRIRDIIDDTKYPPQEGKY
KIYILDEVHMLSGGAVNAFLKTLEEPPSNVIFILATTDPQKLPITILSRCQRFDFKRINQ
KDISDRLRKITESQNVSVDEKSLDLIARVADGAMRDSLSILDQAIAMGDNNIKYDDLISI
LGLVTNEYLFDITNSIVERNIEKAMVIIDKLVFSGKDIHLFIKDLIGHFRNLLMVKVSNT
PEEILDMSLENIELIKEQGKKIRIEEIMRGIRILQEGEANSKVSKQSRLYLELSIIKMCK
IEYDTSSEVMLARINKLEESIKSGKIQVVSNSQINEKAPLTDVVPNNQIKSKEKQVKKEQ
PNLSEEHNVNVESSLTIDNIKRAWSEILEAFKAKRAMVIYASIVTARPYKFENGVATLLY
EASYAFNKNRLEKLEYKKIVNEVFSEVLKDKIIVRYEVENNKDGESSKEELLKQRLDGMP
FEILDE
NT seq 1641 nt   +upstreamnt  +downstreamnt
ttgggatatacagctttatatagagagtggagaccaaggacatttaatgatgtagtaggt
caggaacatataacaacaacgttgaaaaatgaaattttaaatgacagaattgcacatgca
tatcttttctgtggaacaagaggaacaggtaaaacatcaacagctaaagttatggctaaa
gcattaaattgttttaatattcaagatggagagccttgcaatgaatgtgagatgtgtaaa
aagataaatgaaggcttatcaatggatgttacagaattagatgcagcatctaacaatgga
atagatagaataagagatataattgatgatacaaaatatcctccacaagagggtaagtat
aagatttatatattagatgaagttcatatgttatcagggggagcggtaaatgcattttta
aaaacattagaagaaccgccaagtaatgttatatttatattagcaactactgaccctcaa
aaattgcctataactattttatctagatgtcaaagattcgattttaaaagaataaatcaa
aaggatatttcagatagattaagaaaaataactgaatcacaaaatgttagtgttgatgaa
aagagcttagatttaattgctagagtggctgacggtgctatgagagactctttaagtata
ttagatcaagcaatagctatgggtgataacaatataaaatatgatgacttaataagcata
ttaggattggttacaaatgaatatttatttgacataactaattcaatagtagaaagaaat
atagaaaaagctatggtgataattgataaattagttttttcaggcaaggatattcattta
tttataaaagatttaataggacattttagaaatttacttatggttaaggtttctaatact
ccagaagagattttggatatgtctcttgaaaatattgaacttataaaagagcaaggtaaa
aaaatacgtattgaagaaataatgagagggattagaattcttcaagaaggggaagctaat
tctaaagtaagcaaacaaagcagattatatttagagcttagtataataaagatgtgtaaa
atagaatatgatacatcaagtgaagtcatgcttgctaggataaataagttagaagaaagc
ataaaaagtggtaagatacaagtagtatcaaattcacaaataaatgaaaaagcaccttta
actgacgtagtgccaaataatcaaattaaatctaaagaaaaacaagttaaaaaagaacaa
cctaatttatcagaagaacataatgttaatgttgagtcttctttaacaatagataatata
aaaagagcgtggtcagaaatattagaggcatttaaagcaaaaagagcaatggttatatat
gcatctatagtaactgcaagaccatataaatttgaaaatggtgtagccacgttattatat
gaggcatcatatgcttttaataaaaatagattagaaaaattagaatataaaaaaattgtt
aatgaagtattttccgaagtattgaaagataaaataatagtaaggtatgaagttgaaaat
aataaagatggcgaatcaagtaaagaagaattgctaaaacaaaggttagatggaatgcct
tttgaaatattagacgaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (30)   

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