KEGG   Clostridium botulinum A3 Loch Maree: CLK_A0115
Entry
CLK_A0115         CDS       T00670                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
cbl  Clostridium botulinum A3 Loch Maree
Pathway
cbl03030  DNA replication
cbl03430  Mismatch repair
cbl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLK_A0115 (dnaN)
   03430 Mismatch repair
    CLK_A0115 (dnaN)
   03440 Homologous recombination
    CLK_A0115 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbl03032]
    CLK_A0115 (dnaN)
   03400 DNA repair and recombination proteins [BR:cbl03400]
    CLK_A0115 (dnaN)
Enzymes [BR:cbl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CLK_A0115 (dnaN)
DNA replication proteins [BR:cbl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CLK_A0115 (dnaN)
DNA repair and recombination proteins [BR:cbl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CLK_A0115 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_3 DNA_pol3_beta_2 DNA_pol3_beta DUF6886
Other DBs
NCBI-ProteinID: ACA57312
UniProt: B1L2K4
Position
pCLK:90876..92021
AA seq 381 aa
MNIKVNGGEFKKYIGLALKSTASSAVNANDIINISTDNSNLIILSGSSDFTLKQKLSNVI
ISEEGNINISVTILNAIIKKMTNEEISLFIDPKNNDVLKIKQGRNNSKIALAKEHTISDI
LKSDIIYSLNLDAKVFKSLIDTTSYAVAQDESRPILLGQYIELEKNLIKITALDGFRLVS
NSAKIENQHEDMILIHANNLRNLSSLIDDSTEEVILNKNNNKAIVEVKNKNYVAIAASNI
FSEEFIEYKQLIGDLSSFPIKITVDRLQLLNTVDRISVVSSFVKEGTHILMKLNKDSLEI
DGNSSVASMKGEVNIINNNFQEEFTIGFNPKYILDALKNINTKEIDIFFNSNVSPVIIIN
KPEKAEDISVNALVLPVKTIS
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaacataaaagttaatggtggagaattcaaaaaatatataggattggcattaaaatct
acagcatccagtgctgtcaatgccaatgatataattaatattagtaccgataatagtaac
ctaattatattatctggatcaagtgattttacattaaaacaaaagttaagtaatgtaata
atttcagaagaaggtaatataaatattagcgttaccatattaaatgctattattaaaaaa
atgactaatgaagaaatatcattatttatagatcctaaaaataatgatgttttaaaaata
aagcaaggtagaaataattcaaaaattgctcttgcaaaagagcatactatatcagatatt
ttaaaatctgatataatatatagtttaaatcttgatgcaaaagtatttaaaagcttaata
gacactacttcttatgcagttgcacaagatgaatcaaggcctatcctattaggccaatac
attgaattagaaaagaatttaatcaaaattactgcactagatggatttagattagtttct
aatagtgcaaaaatagaaaatcaacatgaagatatgatattaattcatgcaaataaccta
agaaatctgtcatcattaattgatgacagcacagaagaggttatattaaataaaaataat
aataaagcaatagtagaagttaaaaataaaaactatgtagctattgctgcttctaatatt
ttttcagaagagtttattgaatataagcagcttataggggacttgtcatcatttcctata
aaaataaccgtagatagattacaattattaaatactgtagatagaatttctgtagtttct
agtttcgttaaagaaggtactcatatcttaatgaaactaaataaagactcactagaaatt
gatggcaacagctctgttgcatcaatgaaaggtgaagtaaatattataaataacaatttt
caagaagaatttacaataggatttaatcctaagtacattcttgatgctttaaaaaatata
aacacaaaagaaatagatatatttttcaatagcaatgtatctcctgttattataataaac
aagccagaaaaagcagaggatattagtgtaaatgcattagtccttccagttaaaactatt
agttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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