KEGG   Clostridium botulinum F 230613: CBF_1961
Entry
CBF_1961          CDS       T01865                                 
Symbol
truA-1
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
cbm  Clostridium botulinum F 230613
Brite
KEGG Orthology (KO) [BR:cbm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbm03016]
    CBF_1961 (truA-1)
Enzymes [BR:cbm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     CBF_1961 (truA-1)
Transfer RNA biogenesis [BR:cbm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CBF_1961 (truA-1)
 Prokaryotic type
    CBF_1961 (truA-1)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ADF99649
Position
2092430..2093170
AA seq 246 aa
MTNIKLYIQYDGSKYNGWQKQKENDNTIQGKIENVLSLMTGEDINLIASGRTDTGVHANM
QVANFHTTFQGSTDEILSYCYEYLPKDIVVYDAFHVDERFHSRLNVKKKKYTYKICNKKF
HDVFSRKYSYHVPETLDIEAMKEACTYLVGRHDFASFTAARSKKKSTVRTLYSIDIIKKD
GYVNLVYLGSGFLHKMIRILTGTLIEVGLHNLKSVDCKNILKAEDRRKAGPTAPSQGLFM
TSVDYE
NT seq 741 nt   +upstreamnt  +downstreamnt
atgactaatataaaattatatatacaatatgatggttccaaatataacggttggcaaaaa
caaaaggaaaatgacaatactattcaagggaaaattgaaaatgtactttcacttatgaca
ggagaagatataaacctaatagcttctggtagaacagatacaggcgtacatgcaaatatg
caggtagccaattttcatacaacttttcaaggttctacggatgaaatattaagctattgc
tatgaatatttacctaaagatattgtagtttatgatgcttttcatgtggatgaaagattt
cactctagattaaatgttaaaaagaaaaagtatacctataagatttgtaataaaaaattt
catgatgtattctctaggaaatactcttatcatgtaccagaaactctagatatagaggct
atgaaagaagcttgtacttatttagtaggaagacatgattttgcatcatttaccgcagca
agatcaaaaaagaaatccactgtaagaactctttatagcatagatattataaaaaaggat
ggctatgtaaacttagtatacttaggcagtggatttttacataaaatgataagaatatta
acaggtactcttatagaagtaggattacacaatctaaaatctgtagattgtaaaaacata
ctgaaggcagaagatagaagaaaagcaggacctactgctccaagtcaaggattatttatg
acaagtgtagattatgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system