KEGG   Clostridium botulinum F 230613: CBF_3426
Entry
CBF_3426          CDS       T01865                                 
Name
(GenBank) RNA pseudouridine synthase family protein
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
cbm  Clostridium botulinum F 230613
Brite
KEGG Orthology (KO) [BR:cbm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cbm03009]
    CBF_3426
Enzymes [BR:cbm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     CBF_3426
Ribosome biogenesis [BR:cbm03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    CBF_3426
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ADG00983
Position
complement(3571657..3572373)
AA seq 238 aa
MERLDKILANLGYGTRKEVKALIKKGQVDVDGEVVKDNGMQIDPEKNKIFVFGKELVYKK
YIYLMMNKPQGVVSATFDNYDETVIDLLEDEDRIFEPFPVGRLDKNTVGLLLLTNDGELN
HRLISPKWHVDKIYYAKINKKVTDEDIKKFKKGIILDDGYECFPAKLEIIKSFNEESEVR
VTIHEGKFHQVKRMFESVDKKVIYLKREEFGPLKLDESLEEGEYRELTDEEISILKNL
NT seq 717 nt   +upstreamnt  +downstreamnt
atggaacgtttagataaaatactagccaacttaggatatggtacaagaaaagaagttaag
gctttgattaaaaaagggcaagttgatgttgatggtgaagttgttaaagataatggtatg
caaatagatccagaaaaaaataaaatatttgtatttggaaaagaattagtttataaaaaa
tatatttatttaatgatgaataaaccccaaggggtagtttctgcaacttttgataactat
gatgaaactgttatagatttgttagaagatgaagacagaatctttgaaccttttcctgtg
ggtaggttagataaaaatacggtaggcttacttttgcttactaacgatggtgagttaaat
cacagacttatatctcctaaatggcatgtggataaaatatattatgccaaaattaataaa
aaggttactgatgaagatataaagaaatttaagaaaggtataatattagatgatggttat
gaatgttttcctgcaaagcttgaaataataaaatcatttaatgaggaatcagaagtaaga
gttactatacatgaaggtaaatttcatcaagtcaaaagaatgtttgaaagtgttgataaa
aaggttatttacttaaaaagagaagaatttggaccattaaaattagatgagagcttagaa
gagggtgaatatagggaattaacagatgaagaaatatctatattaaaaaatctataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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