KEGG   Clostridium botulinum BKT015925: CbC4_0172
Entry
CbC4_0172         CDS       T01475                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
cbn  Clostridium botulinum BKT015925
Pathway
cbn00470  D-Amino acid metabolism
cbn00550  Peptidoglycan biosynthesis
cbn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cbn00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CbC4_0172 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CbC4_0172 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cbn01011]
    CbC4_0172 (murD)
Enzymes [BR:cbn01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     CbC4_0172 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:cbn01011]
 Precursor biosynthesis
  Amino acid ligase
   CbC4_0172 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C DUF166 Pyr_redox AlaDh_PNT_C Oxidored_nitro
Other DBs
NCBI-ProteinID: AEB74855
Position
178351..179727
AA seq 458 aa
MKKNFNEFKDFIKDKRVAVVGIGISNIPLIHFLVKLGAEVTAFDKKDEEKLGDIAIEFKS
KGIKLELGEEYLNNLIGFDVVFKTPSMRIDNEALVRAKESGSYITSEMEEFIKYCPAKVF
GITGSDGKTTTTTLVYNMLKSEGYKTWVGGNIGNPLFANIEEMTKADKVVLELSSFQLMT
IKEDMNCALVTNLSPNHLDIHKDMEEYVDAKKNIFKYQNENDLLVLNKDNKITNDLVNEA
KGKVKQFSIKEEIHNGAYFKNDKLFILDKEVCALEEIKLKGMHNVENLLAAFCLVNEDVS
INNMRKVAISFTGVEHRCEFVRELDGVKYYNDSIASSPTRTIAGLRAFEKPVILIAGGYD
KHIPFEPLAEEGYDKIKALILTGVTKEKIKKAFDNVIENKPYKIPIYMVERFEEAIYKAK
EISKAGDIVTLSPACASFDMFANFEIRGNKFKDIVNNL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaagaaaaattttaatgaatttaaagattttatcaaagataaacgagtagcggttgtt
gggatagggataagtaatattcctttaattcattttttggttaagttaggagcggaagta
actgcttttgataaaaaagatgaagaaaaactaggggatatagctatagagtttaaaagc
aaaggtattaaattagaacttggagaagaatatttaaataatttaataggatttgatgtt
gtttttaaaactccatctatgagaatagataatgaagccttagtaagggctaaagagtca
gggtcttatataacttctgaaatggaagagtttattaaatattgtccagctaaagttttt
gggataacaggaagtgatggaaaaacaacaacaacaactcttgtatataatatgttaaaa
agcgaaggttacaagacatgggtagggggaaatatcgggaatcctctttttgcaaatata
gaagaaatgactaaagcagataaggttgttttagaattatctagttttcaacttatgact
ataaaagaagatatgaattgtgcattagttactaatctatctccaaatcatttagacatt
cataaagatatggaagaatatgtagatgctaagaaaaatatatttaaatatcaaaacgaa
aatgatttattagttttaaataaggataataaaataacaaatgatttagtaaatgaagct
aagggaaaagttaagcaatttagtataaaagaagaaattcataatggtgcgtactttaaa
aatgataagctgttcattttagataaagaagtttgtgcattagaagaaataaagctaaag
gggatgcataatgtagaaaatcttttagcggctttttgcttagtaaatgaagatgtaagt
attaataatatgagaaaagttgctataagttttactggagttgaacatagatgtgaattt
gtaagagaacttgacggtgttaaatattataatgattctatagcctcaagtccaacaaga
accattgcaggacttagagcttttgaaaaacctgtaattttaattgctggaggatatgat
aagcatataccatttgaacctttagctgaagaaggatatgataaaatcaaagctttaatt
ttaactggggttactaaagagaagataaaaaaagcttttgataatgttattgaaaataaa
ccatataaaattcctatttatatggtagaaagatttgaagaagccatttacaaggctaaa
gaaatttcaaaggcaggagatatagtgacattatcacctgcatgtgctagttttgatatg
tttgctaatttcgaaataagaggaaataagtttaaagacatagtaaataatttataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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