KEGG   Candidatus Viadribacter manganicus: ATE48_09415
Entry
ATE48_09415       CDS       T04422                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cbot  Candidatus Viadribacter manganicus
Pathway
cbot03420  Nucleotide excision repair
cbot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ATE48_09415
   03430 Mismatch repair
    ATE48_09415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbot03400]
    ATE48_09415
Enzymes [BR:cbot01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ATE48_09415
DNA repair and recombination proteins [BR:cbot03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATE48_09415
   MMR (mismatch excision repair)
    Other MMR factors
     ATE48_09415
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 HHH AAA_11 HHH_3 HHH_5
Other DBs
NCBI-ProteinID: ANP46123
UniProt: A0A1B1AHT3
Position
complement(1827746..1829767)
AA seq 673 aa
MSRITSVALDDLNAEQRAAVEHGSAPLLVIAGAGSGKTKTLSCRVAHLVANGADPSRILL
LTFSRRAASEMIARVGKVMAGDVRIPWAGTFHAIGARLLRELAPVIGIDPEFTIHDRSDS
ADLMSMVRQELGVATGAKRFPMKGTCLAIYSRVVNADESIDDAVVAQFPWCREWTAELKT
LFGAYVEAKQKQNVLDYDDLLWLWAEAMNEPALAAEVGARFEHVLVDEYQDTNKLQARIL
LAMKPDGRGVTVVGDDAQSIYSFRAADVRNILEFPKAFTPEARLVTLEQNYRSTSPILDA
SNAVIDLAKERFTKNLRTTRSGGTAPKLVSVRDEAAQASYIAESVLEARERGLTLMQQAI
LFRAADFSAPVELELAKRDIPFVKFGGLKFLEAAHVKDFLAILRWAQNGGDRIAGFRTLQ
LVPGVGPAKAARILDAVDEFGPYGAVRNTAPPAGAAEAWDALKEMLAAMEKTPAWPSDLD
LAARWYTPMMNERYDDARVRAGDIDQLQRIGATFGGRTSFLTELTLDPPNSTSDESGKSS
KDDDYLILSTIHSAKGQEWKNVFVLNVVDGCMPSDLGTGSTAALEEERRLLYVAMTRAKD
ELHLITPQRFYHTQQSRGGDKHVYAIKSRFLPEYVCSKFQQTAWAPEPAPGEAGANGPLP
KIDLAAKARSRFS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgtcgcgaatcacgtcggttgcgctggatgatctgaacgctgagcagcgtgcggcggtg
gagcatggctctgcgccgttgctggtgattgcgggtgcggggtcggggaagacgaagacg
ttgtcttgccgcgtggcgcatcttgttgcgaatggcgccgatccgtcgcgcattctgttg
ctgacgttttcgcggcgggcggcgagtgagatgattgcgcgcgtcggcaaggtgatggcc
ggcgatgtgcgtattccgtgggccgggacgtttcacgcgattggcgcgcggctgttgcgg
gaactggcgccagtgatcggcatcgatccggagttcaccatccacgatcgcagcgatagc
gccgatctgatgagcatggtgcgccaggagcttggcgtcgcgacgggcgcgaaaaggttt
ccgatgaaggggacgtgcctcgcgatttattcgcgcgtcgtgaatgcggatgagtcgatc
gacgatgcggtggtggcgcagtttccatggtgccgcgagtggaccgcggagctgaagacg
ctgttcggcgcgtatgtcgaagccaaacagaagcagaacgtgttggattacgacgatctg
ctttggctctgggccgaggccatgaatgagccggcgctcgcggccgaagttggcgcgcgg
ttcgagcacgttctggtcgatgaatatcaagacacgaacaagctgcaggcgcgcattctg
ttggcgatgaagccggatgggcgcggcgtgactgtggtcggcgatgatgcgcagtcgatc
tattcgttccgcgcggcggatgtgcgcaatattctggagtttccgaaagcgtttacgccg
gaggcgcggctggtgacgctggagcagaactatcgctcgacgtcaccgatcttggatgcg
tcgaacgcggtaatcgatctggcgaaggagcgcttcaccaaaaatctgcgcacgacacgc
agcggcggaacggcgccgaagctggtgagcgtgcgtgatgaggcggcgcaggcgagttac
atcgccgagagcgtgcttgaggcgcgcgagcgcgggctgactttgatgcagcaggcgatc
ctctttcgcgcggcggatttttcggccccggtggagctggagctggcgaagcgcgacatt
ccgttcgtgaaattcggtggcctgaagtttcttgaagcggcgcatgtgaaggattttctg
gcgatcctccgttgggcgcagaatggcggcgatcggatcgcgggatttcgtacgttgcag
ctcgtgccgggggttgggcccgcgaaggcggcgcgcattctggatgcggtggatgagttc
ggcccctatggcgcggtgcgcaacactgcgccgccagcgggcgcggctgaggcgtgggat
gcgttgaaagaaatgcttgccgcgatggagaagacgccggcctggccaagcgatcttgat
ttggcggcgcgttggtacacgccgatgatgaacgagcgctatgacgacgcccgcgtgcgc
gctggtgacatcgatcaattgcagcgcatcggtgcgacgtttggcgggcgcaccagtttc
ttgaccgagctcacgctcgatccgccgaactcgacgagcgatgagagtggcaagtcatcg
aaggacgacgactatctgatcttgtcgacgatccattcggccaaggggcaggaatggaag
aatgtgttcgtgttgaatgtggttgatggctgcatgccgtccgatctcggcacgggatcg
acggcggcgttggaagaggagcggcggctgctctacgtggcgatgacgcgcgcgaaggat
gagctgcatctcatcacgccgcagcggttctatcacacgcagcaatcgcgcggcggcgac
aagcacgtgtatgcgatcaaatcgcgcttcttgcctgaatatgtgtgctctaagtttcag
cagacggcatgggcgccggagcctgcgcccggcgaagctggtgcgaacgggccgttgccg
aagatcgatcttgctgcgaaggcgcgctctcggttcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

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