KEGG   Coxiella burnetii RSA 493: CBU_2086
Entry
CBU_2086          CDS       T00124                                 
Symbol
rho
Name
(RefSeq) transcription termination factor rho
  KO
K03628  transcription termination factor Rho
Organism
cbu  Coxiella burnetii RSA 493
Pathway
cbu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CBU_2086 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbu03021]
    CBU_2086 (rho)
   03019 Messenger RNA biogenesis [BR:cbu03019]
    CBU_2086 (rho)
Transcription machinery [BR:cbu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CBU_2086 (rho)
Messenger RNA biogenesis [BR:cbu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CBU_2086 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_25 AAA_22 Spore_III_AA AAA
Other DBs
NCBI-GeneID: 1209999
NCBI-ProteinID: NP_821056
UniProt: Q83A25
Position
complement(1986125..1987381)
AA seq 418 aa
MNLTDLKQKSVPELMQIAQEMNLEYVSRTRKQDIIFAVLKAHAKKGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVSGKIRPPKESERYFALLQVNEIN
LEKPEASKGKILFENLTPLFPNEQIRMETGNGSTEDITARIIDLISPIGKGQRGLIVSPP
KAGKTMMLQNIAHSITTNHPECVLIVLLIDERPEEVTEMDRSVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIATALVETGSKMDDVIYEEFKGTGNMEIHLDRRIAEKRTFPAINI
NRSGTRREELMMPQDVLQKVWILRKILHPMDELAASEFLIDRLKLTKTNNDFFDSMKG
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgaatttaactgatcttaaacaaaaatcggttccggaattaatgcaaattgctcaggaa
atgaatctggaatacgtttctcgtacacgaaaacaagacattatatttgcagtattaaaa
gcacatgctaaaaaaggcgaagatatttttggcgatggtgttcttgaaattttacaagac
ggttttggatttttacgatccgcagacagttcttatttagccggccccgatgatatttat
gtttccccgagtcaaattcgacgctttaatttgcgaacaggcgatacggtttcaggaaaa
attcgccctcctaaagaaagcgaacgctacttcgctttactccaagtcaatgaaatcaac
ctcgaaaaaccagaagcgtcaaaaggcaaaattttatttgaaaaccttacgccgctcttt
ccaaacgagcagattagaatggaaacgggcaatggcagcacggaagatattaccgctcgt
atcattgatttgatttcacccatcggaaaaggccagcggggccttatcgtttcgccgcca
aaagccggtaaaacgatgatgttacagaatatcgctcattcaatcacgacaaatcatccg
gaatgtgtactcatcgtattgttgattgatgagaggcctgaagaagtcaccgaaatggac
cgttcagtaaaaggggaagtagtagcaagtacgtttgacgagccggcctcgcgccatgtt
caagtggcagagatggtgattgaaaaagcgaaacggttggtcgaacataaaaaagacgtt
gttattttattggattccatcactcgtttagcgcgcgcgtataacacggtaattcctgct
tccggaaaggtattgaccggcggcgtggacgctaatgcgttgcaacgaccgaagcgattt
ttcggagcggcgcgcaacgtggaagaaggtggcagtttaacaattatagcgacggcgttg
gttgaaaccggttctaagatggatgacgtcatttacgaagaatttaaaggaacgggcaac
atggaaattcatttggatcgccgcatcgcagaaaaacgaactttccctgccattaatatc
aatcgttccggcactcgccgtgaagaattaatgatgccacaagacgttttacaaaaagtt
tggatattacgtaaaatcttacatcccatggatgaacttgctgccagcgaatttttaatc
gatcgcttaaagttaacaaaaacaaataatgacttttttgattcaatgaaaggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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