KEGG   Cupriavidus basilensis: RR42_s1705
Entry
RR42_s1705        CDS       T03642                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
cbw  Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:cbw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbw03032]
    RR42_s1705
   03036 Chromosome and associated proteins [BR:cbw03036]
    RR42_s1705
   03400 DNA repair and recombination proteins [BR:cbw03400]
    RR42_s1705
DNA replication proteins [BR:cbw03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RR42_s1705
Chromosome and associated proteins [BR:cbw03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RR42_s1705
DNA repair and recombination proteins [BR:cbw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RR42_s1705
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF6849 HU-CCDC81_euk_2 HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: AJG23293
UniProt: A0A0C4YJR1
Position
secondary:1855225..1855506
AA seq 93 aa
MNKGELVSAIAADAELSNAAAERALNAALDNIKKAVAKGDSVTLVGFGSFSSGKRAARTG
RNPRTGETIKIPAAKTVKFSAGQGFKDAVNKKK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgaataaaggtgaactggtatctgccatcgccgctgacgcggaactgagcaatgctgca
gcagagcgcgcgctgaatgccgctctggacaacattaagaaggcggttgccaagggtgat
tcggtaacgctggtgggcttcggcagcttcagctccggcaagcgcgctgcacgtaccgga
cgcaatccgcgtactggcgagaccatcaagattccggccgccaagacggtcaagttctct
gccggccaagggttcaaggacgctgtgaacaagaagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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