KEGG   Candidatus Symbiobacter mobilis: Cenrod_1109
Entry
Cenrod_1109       CDS       T02877                                 
Symbol
gspD-1
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
cbx  Candidatus Symbiobacter mobilis
Pathway
cbx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cbx00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Cenrod_1109 (gspD-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cbx02044]
    Cenrod_1109 (gspD-1)
Secretion system [BR:cbx02044]
 Type II secretion system
  General secretion pathway protein
   Cenrod_1109 (gspD-1)
SSDB
Motif
Pfam: Secretin Secretin_N TPR_2 STN TPR_11 TPR_1 TPR_19 TPR_14 SHPRH_helical-1st FecR_C COG4_N TPR_7
Other DBs
NCBI-ProteinID: AGX87202
UniProt: U5N735
Position
complement(1198833..1200767)
AA seq 644 aa
MTRIFCYCVLVVWLAGCAAQQAFVRGREHLAAQRWEPALASFLEARELDPDNVEIRAAVT
SSRERAVAAVLGDAASAVAQQQWDKAAQAYRRVLLLDPANDRAQQGLQGVETAQRHQHWF
DEAQRAADAGRDREARAKFQKLLGERPGHAAARQALRALDEKMGYTGQLPVLEAGLRKPV
SMVFRDATLKMVFDALSNNAGVNFVLDRDVRPDTRVSVFLREVAFDEALAQVTRSNGLAQ
RVVNANTILIYPARADKIKEYQDLMVRNFFVANADVKQLSALLKNVLKIKDIHTDDKRNL
IVIRDTPEQVALAEKMVAAHDQPEPEVMLEVEILEFNHTTDNQIGVRFPDQVTFGVASPI
TLQALRAVNDAAVSVSGLDTAVVLNLKRQLGDIHTLANPRIRVRNREKAKFHIGDKVPVI
TSTTYPGSTTGATTSSVSYLDVGIKLEFEPWIGLDDDVVIKTSLEVSAITNTVVNTGTTA
YQVGTRNAATTLTLRDGETQVLAGLYSADETDTRHHLPGLGDIPVLGNLFRSRAIKGGRK
EILLSITPRILRNLHRPTADLLEFNAGPETAVSSGGMAPVPYVAPMPVAPRFPPAVGGMA
PGAGALPASTAPNAPPVPGSPAGSMGNTSTPAMEFEPPPGVGSR
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgacccgcattttttgctactgtgtcctcgttgtgtggcttgccggttgtgcagcgcag
caggcgtttgtccgtgggcgggagcacctggctgcccagcgctgggagccagccttggcc
agctttctggaagcgcgggagctggacccggacaacgtagaaatacgcgctgccgttacg
tcgagcagggagcgcgccgttgcagccgtcttgggcgatgcagcctcggcggtcgcccag
cagcaatgggacaaagcggcccaggcataccgccgcgtgttgctgctcgaccctgccaac
gaccgtgcgcaacagggcttgcagggcgtggagaccgcgcagcgccaccagcactggttc
gatgaagcgcagcgtgcggcggatgcggggagggatcgcgaagcacgcgccaagttccag
aaactgttgggggagcgccccggtcatgcggcggcccggcaagccctgcgggcgcttgat
gagaagatgggctataccggtcagcttccggtgctggaagcagggttgcgcaagccggtg
tcgatggtgtttcgcgatgccacgctcaagatggtttttgacgcgctctcgaacaatgcc
ggggtcaacttcgttctcgaccgagacgtgcggcccgatacgcgggtcagcgtttttctg
cgcgaagtcgcttttgacgaagcgctcgcgcaggtcacccgctccaacggcctcgcccag
cgcgtggtcaatgccaacaccatcttgatctatccggcgcgtgcggacaagatcaaggag
taccaggatttgatggtgcgcaactttttcgtcgccaacgcggacgtcaagcagctttcg
gctctgctcaaaaacgtgctcaagatcaaggacatccataccgacgacaagcgcaacctg
atcgtgattcgcgataccccggagcaggtcgcgctcgcagaaaaaatggtcgccgcgcac
gaccagcccgagccggaagtcatgctcgaagtcgaaatcctcgagttcaaccacacgacc
gacaaccagattggcgtgcgcttccccgatcaggtgacgtttggcgttgccagtccgatc
acgctccaagccttgcgcgcggtcaatgacgcggccgtttccgtcagcgggctggacacc
gccgtggtgttgaacctcaagcgccagcttggagacatccacaccctggccaatccccgc
atccgtgtacgcaaccgggaaaaagccaagttccatatcggcgacaaggttccggtcatt
acctcgacgacctatccaggttcgaccacgggggcgactacctcgtcggtgagctacctt
gatgttgggatcaaactcgaattcgagccatggatcggcctggacgacgatgtcgtcatc
aagacgtcgttggaagtgagtgccatcacgaacaccgtcgtcaacacgggaacgactgcg
taccaggtcggtacccgcaacgctgcaacgacgctgaccctgcgggatggggagacccag
gtgcttgctgggctgtacagcgcggatgaaacggacaccagacaccatcttcccgggctg
ggggatatccccgtgcttggcaatctgttccgaagccgtgcgatcaagggggggcgtaag
gaaatcctgttgtcgatcaccccgcgtatcctgcgcaatctgcaccggcctacagccgat
ctactcgaattcaacgcggggcctgagacggcggtgtcttccgggggcatggcgcctgtg
ccgtatgttgcgccgatgccggtcgctccccggttccctcctgcagtcggtggcatggcc
cctggcgctggcgccctgcctgcgtcgacggcgccgaatgcgccccctgtacccggctca
cccgctggatccatggggaatacttccactcctgctatggaatttgagcctcctcccggc
gtgggcagccgttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (32)   

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