KEGG   Clostridium beijerinckii ATCC 35702: Cbs_4853
Entry
Cbs_4853          CDS       T03415                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cbz  Clostridium beijerinckii ATCC 35702
Pathway
cbz03030  DNA replication
cbz03430  Mismatch repair
cbz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Cbs_4853 (dnaE)
   03430 Mismatch repair
    Cbs_4853 (dnaE)
   03440 Homologous recombination
    Cbs_4853 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbz03032]
    Cbs_4853 (dnaE)
   03400 DNA repair and recombination proteins [BR:cbz03400]
    Cbs_4853 (dnaE)
Enzymes [BR:cbz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Cbs_4853 (dnaE)
DNA replication proteins [BR:cbz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Cbs_4853 (dnaE)
DNA repair and recombination proteins [BR:cbz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Cbs_4853 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 tRNA_anti_2
Other DBs
NCBI-ProteinID: AIU00255
Position
complement(5678986..5682561)
AA seq 1191 aa
MEEKQFCHLHLHTEYSLLDGSGKIGKLMKKAKELGMKSIAITDHGVLYGLVDFYKAAKEN
DIKPILGCEVYVVPKSRHIKQPDKENSTYHLVLLVKNQIGYENLMKIVSVASIEGFYYKP
RIDYEYLRKHSEGLIALSACLGGEVQSYHLKGNYEKAKETALTYKEIFNGDFYIELQNHG
MEEQKRVNEENIKLSNETGIPLVATNDVHYISKEDSRSHDVLMCIQTAKTIDDPHRRRYP
SDQFYLKSADEMWDMFSYVPEALENTIKIANECSYEYKFHESKLPKFPLEEGQDPYDYLR
DTCYKGLIDRYSVFENLRNQNLDYSKIEEVVANYEEAKEYVDRLEYELQVIKQMGYIDYF
LIVWDFVRFSYESGIPTGPGRGSAAGSIVAYTLGITKIDPIKYSLIFERFLNPERVSMPD
IDSDFCYERRQEVIDYVVEKYGASNVSQIITFGTMAARLCIRDVGRAMNYSYAEVDRIAK
MIPTMLGITIEKALDLNPELKLAYDTDERVKALIDVSKDLEGLPRHSSTHAAGVVIASKP
LVEYVPLQKNDEMIVTQFGMNTLEELGLLKMDFLGLRTLTVMNDAVKMIKENRGVDVDLD
KIDFEDEEVYNMIGEGNTAGVFQLESPGMTSFMKELKPDSFEDIIAGISLYRPGPMAEIP
RYIEGKKNSEKVTYLTKELEPILGVTYGCLVYQEQVMQAVRDLAGYSMGRSDMVRRAMSK
KKHKVMEEERKNFIHGIVENDEVIVPGCVRNGISEEIANKIFDSMMDFASYAFNKSHAAA
YAVVGYQTAYLMKYYPVEMIAAMLNSIMGISEKVAYYIGIAEELGIQVLPPNINESFSKF
TVKENKIRFGLAAIKNVGTNVVASIVKAREEKGKFESLVDFINKMDPSSINKRAVECLIK
AGALDDFDVFRSKMLAVHEKLIDNISSDKRRNIDGQISLFASEELKNPEVNYPNIKEFTK
RNLLAMEKEMTGLYITGHPLDDYAQSLKMQTTNEISKIFLVQETLDDSLESDMGEINMFN
RQDALQDNDRVILGGILASVNQKVTRNNSIMAFLKLEDLTGTIEVIVFPKTLEKVKELCV
TDSLVIVKGRLSLKEDEPPKLICESIEPLEKVNTSKVYLRVDDKVAATVLSKKLKELLIK
EYIGDTPIYIFESKGKQKFRVPRDRWISLDSDVMNLLRQTLGDENVKVLDS
NT seq 3576 nt   +upstreamnt  +downstreamnt
atggaagaaaaacaattttgtcatttacatttgcatacagaatatagtttacttgatgga
tcaggaaaaataggaaagcttatgaagaaggcaaaagaattaggcatgaagagtattgct
attactgatcatggagttttatatgggcttgtagatttctataaggcagcaaaagaaaat
gatataaaacctattttaggatgtgaagtttatgtcgtaccaaagtctagacatataaag
cagccagacaaagagaattcaacttatcatttggttttgttagtaaagaatcaaattgga
tatgaaaatctaatgaaaatagtatcagttgcatctattgaaggattttattataagccc
agaatagattatgaatatttaagaaaacatagtgaaggattaattgctttgagtgcatgt
ttaggtggtgaagtacaatcttaccatcttaaaggtaattatgaaaaagcaaaagagaca
gccttaacatacaaagaaatttttaacggtgacttttatattgagttacaaaatcatgga
atggaagaacaaaagagagtaaatgaagaaaatataaagttatctaatgaaactggtata
ccactagttgctactaatgatgttcactacataagcaaggaagattctagatcacatgac
gtactaatgtgtatacaaacagctaaaaccattgatgatcctcatagaagaagatatcct
tcagatcagttttatttaaaatcagcagatgaaatgtgggatatgttttcctatgttcct
gaggcgttggagaataccattaagatagccaatgagtgtagctatgaatataagtttcac
gaatctaagcttccaaaatttccgctagaagaaggtcaagatccttatgactatcttaga
gatacttgctataaaggtctgatagatagatatagtgtatttgaaaatcttagaaatcag
aatttggattatagtaaaattgaagaagtagtagcaaattatgaagaagctaaagaatat
gttgatagactagaatatgagcttcaagtaataaagcaaatgggatatattgactacttt
ttaattgtatgggattttgttagattttcctatgaaagtggaatacctacagggccaggt
agaggatctgcagcaggttcaatagttgcatatacgttaggaattacaaaaatagatccg
attaagtatagtttaatctttgaacgtttcttaaatccagagagagtatccatgccagat
atagatagtgatttttgttatgaaagaagacaagaagtcattgattatgtagtcgagaag
tatggagcaagcaacgtttcgcagataataacgtttggtacaatggcagctagactatgt
atacgagatgttggaagagctatgaattatagttatgcagaggttgatagaatagctaag
atgataccaacaatgcttggaataactatagagaaggcgttagacttaaatccagagctt
aaattagcctatgatacagatgaaagagtaaaggcgttaatagatgtttcaaaggattta
gagggacttccaaggcattcttctactcatgctgctggtgttgttatagcatcaaagcca
ttagttgaatatgttccattacagaaaaatgatgagatgatcgtaactcaatttggaatg
aatacactagaagaactaggattacttaaaatggactttttagggcttagaacattaact
gttatgaatgatgctgttaaaatgattaaagaaaatagaggagtagatgtagatctagac
aagatagattttgaagatgaagaagtttataatatgattggagaaggtaatacagcagga
gtattccaattggaatcaccaggaatgacttcatttatgaaagaattaaagcctgattcc
tttgaagacataattgcaggaatttctttatatagacctggaccaatggctgaaatacca
agatacatagaaggaaagaaaaattcagaaaaagttacgtatttaactaaagaattagag
cctatattaggtgttacgtatggatgtttagtatatcaggaacaagtaatgcaggctgtt
agagatttagctggatactccatgggacgtagtgatatggttagaagagctatgtcaaag
aaaaaacataaagtaatggaggaagaaagaaaaaatttcattcatggtattgttgaaaat
gatgaagtaatagtaccaggatgcgtgagaaatggaatttcagaggaaatagctaataaa
attttcgattctatgatggactttgcttcgtatgcatttaataaatcccatgcagcggca
tatgcagttgttggatatcaaacagcatatcttatgaagtactatccagtagagatgatt
gcagcaatgcttaattcaatcatgggaatcagtgaaaaggtagcatactatatcggcata
gcagaggaacttggaatacaagttttaccacctaatataaacgaaagtttttctaaattc
actgttaaagagaacaagattaggtttggattagcagctataaagaatgttggaactaat
gttgtagcaagcatagtgaaagcaagagaagaaaagggtaaatttgaatcgttagttgat
tttataaataaaatggatccatcatcaataaataagcgtgcagttgaatgtttaataaag
gctggggctctagatgattttgatgtttttagatctaagatgttagctgttcatgaaaaa
ttaattgataatatatctagtgataagagaagaaatattgatgggcaaataagcttattt
gcaagtgaagaattaaagaatccagaagtaaactatcctaatattaaggaatttactaag
cgtaatttattagctatggaaaaggagatgacaggactttatattactgggcatccccta
gatgactatgctcaaagtctgaaaatgcagacaacaaatgagatttctaaaatattttta
gtacaggaaaccttagatgattctctagagagcgatatgggtgaaattaatatgtttaac
aggcaggatgccttacaagataatgatagagtaatccttggaggaatacttgctagtgtt
aatcagaaggtaacaagaaataattctataatggcattcctaaaacttgaagacttaact
ggaacgattgaagtaatagtgttccctaaaactttggagaaagtaaaagaattatgcgtg
acagatagtttggtaatagttaaaggaagattaagtttgaaagaagatgaaccaccaaaa
cttatttgtgaaagtatagaacctttagagaaggtcaatacttcaaaagtatatttaaga
gttgatgataaggtggcagctactgttttaagtaaaaaattaaaagaattattgataaag
gaatatattggagatacgcctatttatatattcgagagcaaaggaaaacaaaagttcagg
gtgccaagagatagatggatttccctagatagtgatgttatgaatttattgagacaaact
ttaggagatgagaatgttaaagtattagattcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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