KEGG T03415: Cbs

Clostridium beijerinckii ATCC 35702: Cbs_5099

Entry

Cbs_5099          CDS       T03415

Symbol

trmE

Name

(GenBank) tRNA modification GTPase TrmE

K03650

tRNA modification GTPase [EC:3.6.-.-]

Organism

cbz Clostridium beijerinckii ATCC 35702

Brite

KEGG Orthology (KO) [BR:cbz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbz03016]
    Cbs_5099 (trmE)
Transfer RNA biogenesis [BR:cbz03016]
Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Cbs_5099 (trmE)
Prokaryotic type
   Methyltransferases
    Cbs_5099 (trmE)

SSDB

Motif

Pfam:

MnmE_helical TrmE_N MMR_HSR1 FeoB_N AIG1 Dynamin_N GTP_EFTU RsgA_GTPase Ras Roc PduV-EutP AAA_16 HflX_C AAA_18 ABC_tran AAA_22 AAA_28 AAA_29 Orthopox_F14

Other DBs

NCBI-ProteinID:

AIU00211

Position

complement(5995050..5996438)

AA seq 462 aa
MKEFDTICAIATPIGEGGVSIIRISGENVLKIASKIFTPRNKYDIESMKTYTMKYGNIVD
LENKKEIIDEVILSYMKAPRSYTGENVVEINCHGGVISTNSVLDQVIKAGARLAEPGEFT
KRAFLNGRIDLSQAEAVMDIITAKTELSMKAAMIQSKGALSKEINELRGYLLNVLALIEY
AVDFTEDDEDIVDDNLILQIKDGIENTNSKIETLLSNADAGKIVRDGLNIVIVGKPNVGK
SSLLNALLRENRAIVTDVPGTTRDIIEEYINLDGIPVKITDTAGIRDTEDVVEKIGVEKS
KEKIEEADLIILMLDASRYIDEEDSRIINKIKNRKYIVLLNKMDLKDIKIQEEILKNLSN
IINISAKTGQGIDILKDEVKKLFFNGEISSESLIISNARHKQALYKSLENCKMALDKINA
NEYLDLISIYITAAMKALGEITGDELEEDLLNKIFSEFCVGK

NT seq 1389 nt +upstreamnt +downstreamnt
atgaaagaatttgatactatttgtgcgatcgctacaccaatcggagaaggcggagtttca
ataataagaatttcaggggagaatgttttaaagattgctagtaagatatttactcctagg
aataaatacgatattgaaagcatgaaaacatacactatgaagtatggtaatattgtggat
ttagagaacaaaaaagagataattgatgaagttattttaagttatatgaaagcgccaaga
agctatacgggtgaaaacgtggtagaaataaattgtcatggaggagttatatctactaat
agtgtattagatcaggttatcaaagctggtgcaagacttgcagaacctggagaatttact
aaaagagcatttttaaatggaagaatagatttgagtcaggccgaagcagttatggatata
ataactgctaaaacagagttatcgatgaaagccgctatgattcaaagcaaaggggcttta
tctaaagaaataaatgaattaagagggtatttgctaaacgttttagcgctaattgaatat
gcagttgattttacagaggatgatgaggatatcgttgatgacaatttaattttacagatt
aaagatgggatcgagaatacaaattcaaaaattgaaaccttattgtctaatgcggatgcg
ggtaaaattgtgagagatggactcaatatagttattgtaggaaaaccaaatgtaggaaaa
tcttcattacttaatgcattattaagagaaaatagagctatagtaacagatgtcccaggg
acaactagagatataattgaggaatatataaatcttgatggaataccggttaaaataacc
gatacagcaggaataagagatacagaagatgtagtagaaaaaataggtgtggaaaaatca
aaagagaaaattgaagaagcagatctaataatactcatgcttgatgcatctagatatata
gatgaagaagacagtagaataattaataaaataaagaatagaaaatatatagtattatta
aataagatggatttgaaagatataaaaattcaagaagaaatacttaagaatttaagtaat
ataataaatatatcagctaaaactggccaaggaatagatattttaaaagatgaagttaaa
aagttattctttaatggagagataagctctgaaagcttaataatttctaatgcacgacat
aagcaagctttatataaatcattagaaaattgtaaaatggctttagataaaattaatgct
aatgaatatcttgatttaatatcaatttatataacagcggctatgaaagctttaggagaa
ataactggagatgaattagaagaagatttattaaacaaaatttttagtgaattttgtgta
ggaaagtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (34)   

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